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SCN18_14_9_16_R4_B_scaffold_2208_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2692..4488)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 598.0
  • Bit_score: 1084
  • Evalue 0.0
elongation factor 4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60773 similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 603.0
  • Bit_score: 1081
  • Evalue 0.0
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 602.0
  • Bit_score: 1073
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGACCACCCCGATTGACCGTATCCGCAACTTCTCGATCATCGCGCACATCGATCACGGCAAGTCCACGCTGGCCGACCGGTTGATCCAGCGCACCGGCGGGCTTTCCGATCGCGAAATGTCCGCGCAGGTGCTCGACAATATGGAGATCGAGAAGGAGCGCGGCATCACGATCAAGGCGCAGACCGTGCGGCTTGAGTGGAAGGGCCATGTCCTCAACCTGATGGACACGCCGGGCCACGTCGACTTCGCCTATGAAGTGTCGCGCAGCCTCGCCGCGGGCGAGGGCGCGCTGCTGGTGGTCGATGCGGCGCAGGGCGTCGAGGCGCAGACGCTCGCCAACGTCTATCAGTCGATCGAGCATGATCATGAGATCGTGCCGGTGATCAACAAGATCGACCTGCCCGCCGCCGATCCCGAAAAGGTGCGGCACGAGATCGAGGATATCATCGGCATCGATGCCTCCAACGCGATCCTCGCTTCGGCCAAATCGGGGATCGGGATCGACGAGATCCTCGACGCGGTGGTCGAGCGCATCCCCGCGCCGAAGGGCGATCCCGCCGCGCCGCTGAAGGCGATGCTGATCGACAGCTGGTACGATCCGTATCTCGGGGTGGTGATCCTCGTCCGCGTGATCGACGGCGTGCTGCGCAAGGGGCAGCAGGTCACCTTCATGCAGGCCGGGACGCAGCATCTGGTCGATCGCGTCGGCTGCTTCCGCCCGAAGATCGAGCAACTGACCGATCTCGGGCCGGGCGAGATCGGCTTCATCACCGCGCAGATCAAGGACGTCGCGCAGGCGCGCGTCGGCGATACGCTGACCGACGCCAAGCGCCCCGCGACCGAGGCGCTGCCGGGCTTCAAGGAAGTCCAGCCGGTGGTGTTCTGCGGGTTGTTCCCGGTCGACGCCAACGACTTCGAGAAACTGCGCGAATCGATCAGCAAGCTCAGGCTCAACGACGCCTCGTTCAGCTTCGAGATGGAAACCTCGGCGGCGTTGGGCTTCGGCTTCCGCTGCGGCTTCCTCGGGCTGTTGCATCTCGAGATCATCCAGGAGCGGCTGACCCGCGAGTACGATCTCGATCTCATCACCACCGCGCCGAGCGTGGTCTATCAGATCGAGCTGACCCATGGCGGCGGGCATATCGAGCTGCACAACCCGGCCGACATGCCCGATCCCAACAAGATCGAGACGATCAGCGAGCCGTGGATCGATGCGACGATCTACGTGCCCGACGAATATCTCGGGTCGATCCTCAAATTGTGCCAGGACCGGCGCGGGATCCAGAAGGACCTCACTTATGTCGGCGGGCGCGCGCAGCTGCGTTACGAGCTGCCGCTCAACGAAGTGGTGTTCGACTTCTACGACCGTCTGAAATCGATCAGCCGCGGCTATGCCAGCTTCGATTATCACCAGATCGGCTATCGCGAGGGCGACCTCGTCAAGATGTCGATCCTGGTCAATGCCGAGCCGGTCGATGCGCTAAGCATGATCGTCCACCGTGCCTCGGCCGAGATCCGCGGGCGCGGGATGTGCGAGCGGCTCAAGGAACTGATCCCACGGCACCTGTTCAAGATCCCGATTCAGGCGGCGATCGGCGGCAAGGTGATCGCGCGCGAGACGATCGCCGCGCTGCGCAAGGACGTCACCGCCAAATGCTATGGCGGCGATATCACGCGTAAGCGCAAGCTGCTTGAGAAGCAGAAGGAAGGTAAGAAGCGGATGCGCGAGTACGGCTCGGTGCAGATTCCGCAGGAAGCCTTTATCGCGGCGCTGCGCATGGGCGACGAGGGGTGA
PROTEIN sequence
Length: 599
MTTPIDRIRNFSIIAHIDHGKSTLADRLIQRTGGLSDREMSAQVLDNMEIEKERGITIKAQTVRLEWKGHVLNLMDTPGHVDFAYEVSRSLAAGEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAADPEKVRHEIEDIIGIDASNAILASAKSGIGIDEILDAVVERIPAPKGDPAAPLKAMLIDSWYDPYLGVVILVRVIDGVLRKGQQVTFMQAGTQHLVDRVGCFRPKIEQLTDLGPGEIGFITAQIKDVAQARVGDTLTDAKRPATEALPGFKEVQPVVFCGLFPVDANDFEKLRESISKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLTREYDLDLITTAPSVVYQIELTHGGGHIELHNPADMPDPNKIETISEPWIDATIYVPDEYLGSILKLCQDRRGIQKDLTYVGGRAQLRYELPLNEVVFDFYDRLKSISRGYASFDYHQIGYREGDLVKMSILVNAEPVDALSMIVHRASAEIRGRGMCERLKELIPRHLFKIPIQAAIGGKVIARETIAALRKDVTAKCYGGDITRKRKLLEKQKEGKKRMREYGSVQIPQEAFIAALRMGDEG*