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SCN18_14_9_16_R4_B_scaffold_2208

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2208_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..661
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC28
Uncharacterized protein {ECO:0000313|EMBL:AHE55855.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
peptidase
SCN18_14_9_16_R4_B_scaffold_2208_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(651..1253)
DNA (603bp) protein (201aa)
molybdate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4D6AB
ABC transporter family protein {ECO:0000313|EMBL:EZP51860.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ABC transporter-like protein
SCN18_14_9_16_R4_B_scaffold_2208_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1243..1905)
DNA (663bp) protein (221aa)
Molybdate ABC transporter, permease protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU9_9SPHN
ModB protein {ECO:0000313|EMBL:GAN12719.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
molybdate ABC transporter permease
SCN18_14_9_16_R4_B_scaffold_2208_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1929..2672)
DNA (744bp) protein (248aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU8_9SPHN
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAM01397.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
molybdenum ABC transporter substrate-binding protein
SCN18_14_9_16_R4_B_scaffold_2208_5
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2692..4488)
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
elongation factor 4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60773
GTP-binding protein LepA
SCN18_14_9_16_R4_B_scaffold_2208_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..5724
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD55B
Protein involved in formation of curli polymers {ECO:0000313|EMBL:EJL34460.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
curli production assembly/transport component csgg
SCN18_14_9_16_R4_B_scaffold_2208_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5777..6298)
DNA (522bp) protein (174aa)
N-acetylglucosamine-6-phosphate isomerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B49B8F
N-acetylglucosamine-6-phosphate isomerase
N-acetylglucosamine-6-phosphate isomerase {ECO:0000313|EMBL:AIT06015.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2208_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..6870)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B1B4C
nicotinamide mononucleotide transporter
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:AIT06016.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2208_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6949..8244
DNA (1296bp) protein (432aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C988
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJP72148.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 9 items

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