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SCN18_25_1_16_R3_B_scaffold_6013

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_6013_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(593..1015)
DNA (423bp) protein (141aa)
50S ribosomal protein L19 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGD2_9PROT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
rplS; 50S ribosomal protein L19
SCN18_25_1_16_R3_B_scaffold_6013_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1051..1821)
DNA (771bp) protein (257aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFU2_9PROT
SCN18_25_1_16_R3_B_scaffold_6013_3
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1818..2342)
DNA (525bp) protein (175aa)
Ribosome maturation factor RimM n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPA4_9PROT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
rimM; 16S rRNA-processing protein RimM
SCN18_25_1_16_R3_B_scaffold_6013_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2365..2628)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF17_9PROT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
rpsP; 30S ribosomal protein S16
SCN18_25_1_16_R3_B_scaffold_6013_5
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2795..3169)
DNA (375bp) protein (125aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG23_9PROT
DNA polymerase I {ECO:0000313|EMBL:KIO50310.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Displaying 5 items

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