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SCN18_25_1_16_R3_B_scaffold_2388

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_2388_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..366
DNA (366bp) protein (122aa)
Transport-associated n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD6_9PROT
Transport-associated protein {ECO:0000313|EMBL:KIO49535.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transport-associated protein
SCN18_25_1_16_R3_B_scaffold_2388_2
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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382..2826
DNA (2445bp) protein (815aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.3)
Butyryl-CoA dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGX6_9PROT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIO49534.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCN18_25_1_16_R3_B_scaffold_2388_3
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2936..3538
DNA (603bp) protein (201aa)
Smr domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH44_9PROT
DNA mismatch repair protein MutS {ECO:0000313|EMBL:KIO49511.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Smr protein/MutS2
SCN18_25_1_16_R3_B_scaffold_2388_4
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3618..4013)
DNA (396bp) protein (132aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD37_NITMU
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ABB73334.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCN18_25_1_16_R3_B_scaffold_2388_5
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4135..4674)
DNA (540bp) protein (180aa)
Thiol peroxidase, Bcp-type n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQR3_9PROT
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KIO49513.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
SCN18_25_1_16_R3_B_scaffold_2388_6
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4862..6109)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGZ0_9PROT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCU61744.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
major facilitator transporter
SCN18_25_1_16_R3_B_scaffold_2388_trna_1
unknown

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6140..6212
DNA (73bp)
transferRNA Arg
SCN18_25_1_16_R3_B_scaffold_2388_7
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6814..7290
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73458.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying 8 items

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