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SCN18_25_1_16_R3_B_scaffold_748

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_748_1
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(2..70)
DNA (69bp) protein (23aa)
SCN18_25_1_16_R3_B_scaffold_748_2
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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118..1278
DNA (1161bp) protein (387aa)
Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEG3_9GAMM
Cobalt-zinc-cadmium resistance protein czcB {ECO:0000313|EMBL:EGV50981.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Membrane-fusion protein
SCN18_25_1_16_R3_B_scaffold_748_3
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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1295..4480
DNA (3186bp) protein (1062aa)
Putative silver efflux pump n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TFQ7_9GAMM
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44386.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
heavy-metal exporter HME family
SCN18_25_1_16_R3_B_scaffold_748_4
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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4487..5386
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER98_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30211.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
czcD; Cobalt-zinc-cadmium resistance protein CzcD
SCN18_25_1_16_R3_B_scaffold_748_5
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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5807..6022
DNA (216bp) protein (72aa)
IS66 Orf2 family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7C8_9BACT
IS66 Orf2 family protein {ECO:0000313|EMBL:EDY17779.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCN18_25_1_16_R3_B_scaffold_748_6
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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6160..6303
DNA (144bp) protein (48aa)
SCN18_25_1_16_R3_B_scaffold_748_7
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(6480..9626)
DNA (3147bp) protein (1049aa)
Heavy metal efflux pump, CzcA family n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DX40_9PROT
Heavy metal efflux pump {ECO:0000313|EMBL:AHE68518.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
cation transporter
SCN18_25_1_16_R3_B_scaffold_748_8
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(9642..10913)
DNA (1272bp) protein (424aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKS6_AZOSU
Cobalt-zinc-cadmium resistance protein CzcB {ECO:0000313|EMBL:AKH43522.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
acetyl/propionyl-CoA carboxylase, alpha subunit
SCN18_25_1_16_R3_B_scaffold_748_9
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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11977..12363
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCK3_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50054.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_1_16_R3_B_scaffold_748_10
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(13207..13845)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BD54_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL64331.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
SCN18_25_1_16_R3_B_scaffold_748_11
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(13805..13963)
DNA (159bp) protein (53aa)
SCN18_25_1_16_R3_B_scaffold_748_12
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(14029..16332)
DNA (2304bp) protein (768aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037B1B9C
Uncharacterized protein {ECO:0000313|EMBL:GAA09830.1}; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis NBRC 101654.;"
Hypothetical protein
SCN18_25_1_16_R3_B_scaffold_748_13
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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16696..17106
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DG69_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGV50379.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_748_14
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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17319..18224
DNA (906bp) protein (302aa)
SMF protein n=3 Tax=Klebsiella pneumoniae RepID=U5MJH1_KLEPN
SMF protein
SMF protein {ECO:0000313|EMBL:ACR12110.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
SCN18_25_1_16_R3_B_scaffold_748_15
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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18202..18828
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Lens) RepID=Q5X040_LEGPL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE65810.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
Displaying 15 items

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