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SCN18_25_1_16_R3_B_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 564 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R3_B_scaffold_12_1
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..11969)
DNA (11967bp) protein (3989aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003737B44
IPT/TIG domain protein {ECO:0000313|EMBL:EAY29389.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
YD repeat-containing protein
SCN18_25_1_16_R3_B_scaffold_12_2
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12285..13424
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003632395
glycerophosphodiester phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:AIF46069.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCN18_25_1_16_R3_B_scaffold_12_3
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13471..13719)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00037519D8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG81292.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCN18_25_1_16_R3_B_scaffold_12_4
unknown

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comp(13905..14870)
DNA (966bp) protein (322aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_5
unknown

Not on your lists

comp(14961..15833)
DNA (873bp) protein (291aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_6
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15984..16913)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381DB19
Uncharacterized protein {ECO:0000313|EMBL:EJJ31593.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_12_7
unknown

Not on your lists

comp(16925..17968)
DNA (1044bp) protein (348aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_8
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17988..20171)
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJG5_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ02769.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCN18_25_1_16_R3_B_scaffold_12_9
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20199..22226)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJG6_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ02770.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCN18_25_1_16_R3_B_scaffold_12_10
unknown

Not on your lists

22643..22753
DNA (111bp) protein (37aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_11
unknown

Not on your lists

22850..23122
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_12
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23130..26684)
DNA (3555bp) protein (1185aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376EFAE
protein kinase
Tax=RBG_16_Aminicenantes_63_16_curated
SCN18_25_1_16_R3_B_scaffold_12_13
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26739..27302)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364E8F3
Uncharacterized protein {ECO:0000313|EMBL:AKC86967.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
RNA polymerase sigma factor
SCN18_25_1_16_R3_B_scaffold_12_14
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27495..28361
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003730453
Thioredoxin {ECO:0000313|EMBL:EIM01757.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thioredoxin
SCN18_25_1_16_R3_B_scaffold_12_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29086..30348)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377F986
Uncharacterized protein {ECO:0000313|EMBL:EIT71855.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_12_16
unknown

Not on your lists

30351..30545
DNA (195bp) protein (65aa)

This feature has no annotations

SCN18_25_1_16_R3_B_scaffold_12_17
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30627..31097
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003817EF2
Translation elongation factor P (EF-P) {ECO:0000313|EMBL:EYR67278.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
tetrameric acyl-CoA thioesterase
SCN18_25_1_16_R3_B_scaffold_12_18
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31247..31900
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003823B9C
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_1_16_R3_B_scaffold_12_19
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31900..33726
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C77EF
putative carboxypeptidase
Putative carboxypeptidase {ECO:0000313|EMBL:AGG88271.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_1_16_R3_B_scaffold_12_20
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34065..36110
DNA (2046bp) protein (682aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B0D69
peptidase
Peptidase {ECO:0000313|EMBL:AHX12355.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_25_1_16_R3_B_scaffold_12_21
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36246..37157
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HRA3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS11815.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
LysR family transcriptional regulator
SCN18_25_1_16_R3_B_scaffold_12_22
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37305..39632
DNA (2328bp) protein (776aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Caulobacter sp. AP07 RepID=J2QCE7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AHE53378.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TonB-dependent receptor
SCN18_25_1_16_R3_B_scaffold_12_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39629..40489
DNA (861bp) protein (287aa)
Putative phosphohydrolase n=1 Tax=Caulobacter sp. AP07 RepID=J2H4M5_9CAUL
Putative phosphohydrolase {ECO:0000313|EMBL:EJL37800.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_12_24
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40486..41880
DNA (1395bp) protein (465aa)
Sugar phosphate permease n=1 Tax=Caulobacter sp. AP07 RepID=J3ATW0_9CAUL
Sugar phosphate permease {ECO:0000313|EMBL:EJL37801.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
major facilitator superfamily transporter
SCN18_25_1_16_R3_B_scaffold_12_25
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41831..42460
DNA (630bp) protein (210aa)
Phosphoglycerate mutase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY59_PARL1
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABS64842.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_1_16_R3_B_scaffold_12_26
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42632..43045)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4R1A2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKC25558.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCN18_25_1_16_R3_B_scaffold_12_27
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43148..46393)
DNA (3246bp) protein (1082aa)
Amidohydrolase family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VP15_9SPHN
Amidohydrolase family protein {ECO:0000313|EMBL:EJU12335.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
amidohydrolase family protein
SCN18_25_1_16_R3_B_scaffold_12_28
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46443..47762)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PIG7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85175.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
SCN18_25_1_16_R3_B_scaffold_12_29
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47752..49206)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAW1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85176.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
amidohydrolase
SCN18_25_1_16_R3_B_scaffold_12_30
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49217..51418)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NTM9_9CAUL
Outer membrane receptor (OMR) family protein {ECO:0000313|EMBL:KCZ94098.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
outer membrane receptor (OMR) family protein
Displaying items 1-30 of 564 in total

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