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SCN18_30_10_14_R1_B_scaffold_2348

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2348_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106..711)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003777417
Uncharacterized protein {ECO:0000313|EMBL:KER34485.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2348_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1016..1438)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035C1416
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF52147.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCN18_30_10_14_R1_B_scaffold_2348_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1450..2391)
DNA (942bp) protein (314aa)
Antirestriction protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS87_9SPHN
Antirestriction protein {ECO:0000313|EMBL:CCW19836.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
antirestriction protein
SCN18_30_10_14_R1_B_scaffold_2348_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2558..4546)
DNA (1989bp) protein (663aa)
ParB family protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GW23_SPHAL
ParB family protein {ECO:0000313|EMBL:ABF52149.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
parB-like partition proteins
SCN18_30_10_14_R1_B_scaffold_2348_5
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4693..8187)
DNA (3495bp) protein (1165aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=N1MKE7_9SPHN
DEAD-like helicase protein {ECO:0000313|EMBL:AGU69311.1}; TaxID=1381597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. ERG5.;"
DEAD/DEAH box helicase-like protein
SCN18_30_10_14_R1_B_scaffold_2348_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8171..8947)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. ERG5 RepID=T1YW96_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AGU69310.1}; TaxID=1381597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. ERG5.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2348_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9170..9682
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036D5591
Uncharacterized protein {ECO:0000313|EMBL:EZP79985.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2348_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10485)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9G3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66215.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2348_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10482..10895)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW18705.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2348_10
SCNpilot_P_inoc_Plasmid_64_5.7, SCNpilot_P_inoc_Plasmid_64_5.7, SCNpilot_P_inoc_Plasmid_64_5.7, SCNpilot_P_inoc_Plasmid_64_5.7, SCNpilot_P_inoc_Plasmid_64_5.7, Plasmid-like

Not on your lists

comp(10950..15128)
DNA (4179bp) protein (1393aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MP80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55737.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methylase/helicase
SCN18_30_10_14_R1_B_scaffold_2348_11
SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, SCNPILOT_SOLID_1_TRIM150_Plasmid_2, Plasmid-like

Not on your lists

comp(15203..15736)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003669707
Uncharacterized protein {ECO:0000313|EMBL:EHJ60568.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
Displaying 11 items

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