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SCN18_30_10_14_R1_B_scaffold_2405

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2405_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..530
DNA (528bp) protein (176aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPH8_9SPHN
Hydrolase of cocE/nonD family {ECO:0000313|EMBL:GAO53320.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative hydrolase
SCN18_30_10_14_R1_B_scaffold_2405_2
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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606..944
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKI6_TERRK
Uncharacterized protein {ECO:0000313|EMBL:GAO37903.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2405_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(973..2127)
DNA (1155bp) protein (385aa)
Monooxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPH2_9SPHN
monooxygenase
Monooxygenase {ECO:0000313|EMBL:BAK68153.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2405_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2232..3227)
DNA (996bp) protein (332aa)
Hydroxyneurosporene-O-methyltransferase {ECO:0000313|EMBL:BAK68152.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAK68152.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Hydroxyneurosporene-O-methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPH1_9SPHN
hydroxyneurosporene-O-methyltransferase
SCN18_30_10_14_R1_B_scaffold_2405_5
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3583..6372
DNA (2790bp) protein (930aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPJ3_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK68174.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2405_6
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6436..7377)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4K9K6_THASP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR01082.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCN18_30_10_14_R1_B_scaffold_2405_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7588..8370
DNA (783bp) protein (261aa)
Response regulator of the LytR/AlgR family n=1 Tax=Methylomicrobium album BG8 RepID=H8GNE2_METAL
Two-component response regulator {ECO:0000313|EMBL:GAM99990.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative two-component response regulator protein
SCN18_30_10_14_R1_B_scaffold_2405_8
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8367..9416)
DNA (1050bp) protein (350aa)
signal transduction histidine kinase, LytS n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A04F
signal transduction histidine kinase LytS
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_30_10_14_R1_B_scaffold_2405_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9500..11443)
DNA (1944bp) protein (648aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E804_9SPHN
monooxygenase
Uncharacterized protein {ECO:0000313|EMBL:EHJ62647.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_30_10_14_R1_B_scaffold_2405_10
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11666..12235
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003659586
carboxymuconolactone decarboxylase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_30_10_14_R1_B_scaffold_2405_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12247..12624
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68347.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 11 items

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