name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_2854_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(241..1095)
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tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS25_9SPHN
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2854_2
unknown
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Not on your lists |
1499..1897
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This feature has no annotations |
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SCN18_30_10_14_R1_B_scaffold_2854_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2109..3419)
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tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
tRNA modification GTPase MnmE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS26_9SPHN
mnmE; tRNA modification GTPase MnmE
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SCN18_30_10_14_R1_B_scaffold_2854_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3444..3701)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS27_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68582.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2854_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3814..4536)
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UPI0003D03B62 related cluster n=1 Tax=unknown RepID=UPI0003D03B62
Membrane protein {ECO:0000313|EMBL:ESZ85690.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
integral membrane protein TerC
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SCN18_30_10_14_R1_B_scaffold_2854_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4570..5826)
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Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
UPI0003D598A2 related cluster n=1 Tax=unknown RepID=UPI0003D598A2
Baf family transcriptional activator
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SCN18_30_10_14_R1_B_scaffold_2854_7
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6144..7793
|
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00037B6F40
Animal heme peroxidase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
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SCN18_30_10_14_R1_B_scaffold_2854_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7810..8268)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS32_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68587.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2854_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8388..9341)
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Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Uroporphyrinogen decarboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS33_9SPHN
hemE; uroporphyrinogen decarboxylase
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SCN18_30_10_14_R1_B_scaffold_2854_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9702..10562
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Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIJ6_9SPHN
putative phosphotransferase
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SCN18_30_10_14_R1_B_scaffold_2854_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10559..11161
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Maf-like protein SLG_00020 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIJ7_9SPHN
putative Maf-like protein
Maf-like protein SLG_00020 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_2854_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11172..11687
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Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Shikimate dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIJ8_9SPHN
aroE; shikimate 5-dehydrogenase
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SCN18_30_10_14_R1_B_scaffold_2854_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11641..11952
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Shikimate dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIJ8_9SPHN
aroE; shikimate 5-dehydrogenase
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SCN18_30_10_14_R1_B_scaffold_2854_14
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11949..12056
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Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Dephospho-CoA kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIJ9_9SPHN
coaE; dephospho-CoA kinase
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