ggKbase home page

SCN18_30_10_14_R1_B_scaffold_8538

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_8538_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY7_9SPHN
choline dehydrogenase
Choline dehydrogenase {ECO:0000313|EMBL:BAK65815.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_8538_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(375..1115)
DNA (741bp) protein (247aa)
Transcriptional regulator, IclR family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZD19_9SPHN
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EGD57495.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
IclR family transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_8538_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1238..2026
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W825_9SPHN
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:ENY79873.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCN18_30_10_14_R1_B_scaffold_8538_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2031..2984
DNA (954bp) protein (318aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNF2_9SPHN
SCN18_30_10_14_R1_B_scaffold_8538_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2981..3463
DNA (483bp) protein (161aa)
4-hydroxy-2-oxovalerate aldolase 3 {ECO:0000255|HAMAP-Rule:MF_01656}; Short=HOA 3 {ECO:0000255|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000255|HAMAP-Rule:MF_01656};; 4-hydroxy-2-keto-pentanoic acid aldolase 3 {ECO:0000255|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase 3 {ECO:0000255|HAMAP-Rule:MF_01656}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
4-hydroxy-2-oxovalerate aldolase 3 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=HOA3_SPHWW
4-hydroxy-2-ketovalerate aldolase
Displaying 5 items

View Taxonomy