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SCN18_30_10_14_R1_B_scaffold_5930

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_5930_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1685)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003630365
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABQ69587.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_30_10_14_R1_B_scaffold_5930_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2122..2919)
DNA (798bp) protein (266aa)
Putative Zn-dependent hydrolase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F262_SPHCR
Metallo-beta-lactamase {ECO:0000313|EMBL:AJR23218.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative Zn-dependent hydrolase
SCN18_30_10_14_R1_B_scaffold_5930_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2972..3673)
DNA (702bp) protein (234aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KEQ53819.1}; EC=1.1.1.31 {ECO:0000313|EMBL:KEQ53819.1};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F261_SPHCR
SCN18_30_10_14_R1_B_scaffold_5930_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3898..4698)
DNA (801bp) protein (267aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AEG50560.1}; EC=1.1.1.30 {ECO:0000313|EMBL:AEG50560.1};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
3-hydroxybutyrate dehydrogenase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F260_SPHCR
SCN18_30_10_14_R1_B_scaffold_5930_5
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4691..6079)
DNA (1389bp) protein (463aa)
MmgE/PrpD family protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F259_SPHCR
MmgE/PrpD family protein {ECO:0000313|EMBL:KEQ53821.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
MmgE/PrpD family protein
SCN18_30_10_14_R1_B_scaffold_5930_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6241..7260
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2B9_SPHCR
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KEQ53835.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCN18_30_10_14_R1_B_scaffold_5930_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7377..8105
DNA (729bp) protein (243aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2B7_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:AJR23233.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
Displaying 7 items

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