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SCN18_30_10_14_R1_B_scaffold_4966

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4966_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..76)
DNA (75bp) protein (25aa)
Pirin-related protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQN8_9SPHN
pirin
Pirin-related protein {ECO:0000313|EMBL:BAK65910.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4966_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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187..1113
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQN9_9SPHN
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK65911.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4966_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1149..2573)
DNA (1425bp) protein (475aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E72B4D
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AJP72250.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_4966_4
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2681..3040
DNA (360bp) protein (120aa)
UPI0003D00658 related cluster n=1 Tax=unknown RepID=UPI0003D00658
Uncharacterized protein {ECO:0000313|EMBL:ESZ86077.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
SCN18_30_10_14_R1_B_scaffold_4966_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3378..5903
DNA (2526bp) protein (842aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INW2_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK65601.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
TonB-dependent receptor-like protein
SCN18_30_10_14_R1_B_scaffold_4966_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6025..7125
DNA (1101bp) protein (367aa)
5-carboxyvanillate decarboxylase n=2 Tax=Sphingomonadaceae RepID=G2IN12_9SPHN
ligW; 5-carboxyvanillate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_30_10_14_R1_B_scaffold_4966_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7139..8263
DNA (1125bp) protein (375aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P090_9SYNC
slr0619; hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
SCN18_30_10_14_R1_B_scaffold_4966_8
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(8305..8391)
DNA (87bp) protein (29aa)
Displaying 8 items

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