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SCN18_30_10_14_R1_B_scaffold_3443

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3443_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..412)
DNA (411bp) protein (137aa)
Conserved hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II13_9SPHN
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:BAK66936.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3443_2
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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665..1375
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIE2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK91675.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3443_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1380..1961)
DNA (582bp) protein (194aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Ribonuclease HII n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II14_9SPHN
rnhB; ribonuclease HII
SCN18_30_10_14_R1_B_scaffold_3443_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1999..3120)
DNA (1122bp) protein (374aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:BAK66938.1}; EC=2.7.4.7 {ECO:0000313|EMBL:BAK66938.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphomethylpyrimidine kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II15_9SPHN
thiD; phosphomethylpyrimidine kinase
SCN18_30_10_14_R1_B_scaffold_3443_5
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3270..4079)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262A7B1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY18992.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_30_10_14_R1_B_scaffold_3443_6
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4198..4422)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262BDC6
Uncharacterized protein {ECO:0000313|EMBL:EKU73756.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3443_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4469..5818)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphoglucosamine mutase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II17_9SPHN
glmM; phosphoglucosamine mutase
SCN18_30_10_14_R1_B_scaffold_3443_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5913..7490)
DNA (1578bp) protein (526aa)
Putative di-/tripeptide transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II18_9SPHN
putative di-/tripeptide transporter
Putative di-/tripeptide transporter {ECO:0000313|EMBL:BAK66941.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3443_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7668..8243
DNA (576bp) protein (192aa)
Putative nitroreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II19_9SPHN
putative nitroreductase
Putative nitroreductase {ECO:0000313|EMBL:BAK66942.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3443_10
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8288..8455)
DNA (168bp) protein (56aa)
Transcriptional regulator, HxlR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4T3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10636.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
HxlR family transcriptional regulator
Displaying 10 items

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