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SCN18_30_10_14_R1_B_scaffold_3612

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3612_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1697
DNA (1695bp) protein (565aa)
YapH-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL55_9SPHN
YapH-family protein
YapH-family protein {ECO:0000313|EMBL:BAK65118.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3612_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1983..2480
DNA (498bp) protein (166aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL56_9SPHN
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAK65119.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3612_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2470..3423
DNA (954bp) protein (318aa)
Putative anti-sigma factor n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL57_9SPHN
putative anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:BAK65120.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3612_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3405..5882
DNA (2478bp) protein (826aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL58_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK65121.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
TonB-dependent receptor-like protein
SCN18_30_10_14_R1_B_scaffold_3612_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6558..7361)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDJ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81808.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3612_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7400..8047)
DNA (648bp) protein (216aa)
purK; N5-carboxyaminoimidazole ribonucleotide synthase PurK (EC:6.3.4.18)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E69389
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
Displaying 6 items

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