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SCN18_30_10_14_R1_B_scaffold_3644

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3644_1
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1051
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI000381DBAD
amino acid/amide ABC transporter membrane protein 2, HAAT family, amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Amino acid/amide ABC transporter membrane protein 2, HAAT family, amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:AFM41645.1}; Flags: Precursor;; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
SCN18_30_10_14_R1_B_scaffold_3644_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1024..1560)
DNA (537bp) protein (179aa)
Putative Xre family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIA9_9SPHN
putative Xre family transcriptional regulator
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:BAK67032.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3644_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1671..3974)
DNA (2304bp) protein (768aa)
Phosphoenolpyruvate-protein phosphotransferase PtsP {ECO:0000313|EMBL:BAK67033.1}; EC=2.7.3.9 {ECO:0000313|EMBL:BAK67033.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphoenolpyruvate-protein phosphotransferase PtsP n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB0_9SPHN
ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP
SCN18_30_10_14_R1_B_scaffold_3644_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4081..5448)
DNA (1368bp) protein (456aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIB1_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67034.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3644_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5627..6637)
DNA (1011bp) protein (337aa)
Putative 2-nitropropane dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRR8_9SPHN
putative 2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:KFD25900.1}; 2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:KEZ20835.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCN18_30_10_14_R1_B_scaffold_3644_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6687..7910)
DNA (1224bp) protein (408aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Aspartokinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRR7_9SPHN
lysC; aspartate kinase
SCN18_30_10_14_R1_B_scaffold_3644_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7973..8737
DNA (765bp) protein (255aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRR6_9SPHN
ubiG; 3-demethylubiquinone-9 3-methyltransferase
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3644_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8744..8965
DNA (222bp) protein (74aa)
mechanosensitive ion channel protein MscS n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A2F8A7
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Displaying 8 items

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