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SCN18_10_11_15_R1_P_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 657 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_7_1
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1..1557
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036660C5
Beta-D-glucosideglucohydrolase {ECO:0000313|EMBL:KGM13786.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
glycoside hydrolase family 3 domain-containing protein
SCN18_10_11_15_R1_P_scaffold_7_2
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1601..2182)
DNA (582bp) protein (194aa)
Putative TetR family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJQ5_MICPN
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL21913.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_7_3
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2193..2810)
DNA (618bp) protein (206aa)
Putative TetR family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJQ5_MICPN
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL31275.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_7_4
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2890..4239)
DNA (1350bp) protein (450aa)
Putative major facilitator superfamily transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XL23_MICPN
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL21914.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
major facilitator superfamily transporter
SCN18_10_11_15_R1_P_scaffold_7_5
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4379..6541)
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003731B90
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:KJL21915.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
SCN18_10_11_15_R1_P_scaffold_7_6
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6538..7401)
DNA (864bp) protein (288aa)
D-alanine--D-alanine ligase {ECO:0000313|EMBL:KJL33722.1}; EC=6.3.2.4 {ECO:0000313|EMBL:KJL33722.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
hypothetical protein n=1 Tax=Acaricomes phytoseiuli RepID=UPI00036B9433
SCN18_10_11_15_R1_P_scaffold_7_7
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7467..8723)
DNA (1257bp) protein (419aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alanine racemase (EC:5.1.1.1)
hypothetical protein n=1 Tax=Acaricomes phytoseiuli RepID=UPI0003653BC7
SCN18_10_11_15_R1_P_scaffold_7_8
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8857..10350)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F0EE45
Uncharacterized protein {ECO:0000313|EMBL:KJL21918.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_7_9
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10505..11113)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0003190387
Uncharacterized protein {ECO:0000313|EMBL:KJL33719.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_7_10
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11221..11709)
DNA (489bp) protein (163aa)
Translation initiation factor IF-2 (Fragment) n=1 Tax=Streptomyces sp. C RepID=D9W0Z7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL33718.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_10_11_15_R1_P_scaffold_7_11
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11822..14623)
DNA (2802bp) protein (934aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288F680
conserved repeat protein
Uncharacterized protein {ECO:0000313|EMBL:KIA75037.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
SCN18_10_11_15_R1_P_scaffold_7_12
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15198..17513
DNA (2316bp) protein (772aa)
Protein kinase/ LuxR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XD33_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:CCH77830.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
LuxR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_7_13
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17548..18477)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CD31B
Glycine betaine-binding protein OpuAC {ECO:0000313|EMBL:KJL21920.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glycine/betaine ABC transporter systems periplasmic protein
SCN18_10_11_15_R1_P_scaffold_7_14
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18470..19417)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318503F
Glycine betaine transport system permease protein OpuAB {ECO:0000313|EMBL:KJL33716.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
proW; glycine/betaine ABC transporter permease
SCN18_10_11_15_R1_P_scaffold_7_15
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19414..20736)
DNA (1323bp) protein (441aa)
Glycine betaine/carnitine transport ATP-binding protein GbuA {ECO:0000313|EMBL:KJL21922.1}; EC=3.6.3.32 {ECO:0000313|EMBL:KJL21922.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG58_9MICO
glycine/betaine ABC transporter ATPase
SCN18_10_11_15_R1_P_scaffold_7_16
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(21063..22214)
DNA (1152bp) protein (384aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000313|EMBL:KJL21923.1}; EC=2.1.1.174 {ECO:0000313|EMBL:KJL21923.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rlmG; ribosomal RNA large subunit methyltransferase G (EC:2.1.1.171)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A1632
SCN18_10_11_15_R1_P_scaffold_7_17
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

22358..24382
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B4E9EB
Uncharacterized protein {ECO:0000313|EMBL:KJL33713.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Hypothetical protein
SCN18_10_11_15_R1_P_scaffold_7_18
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24618..25157
DNA (540bp) protein (180aa)
NUDIX hydrolase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287B1F3
NUDIX domain protein {ECO:0000313|EMBL:KJL32717.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NUDIX hydrolase
SCN18_10_11_15_R1_P_scaffold_7_19
unknown

Not on your lists

25154..25564
DNA (411bp) protein (137aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_7_20
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25718..26368)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346A6E1
Histidine kinase {ECO:0000313|EMBL:EYT58826.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_7_21
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26693..27676)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00037345AC
Uncharacterized protein {ECO:0000313|EMBL:KHK99850.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
PE_PGRS20; PE-PGRS FAMILY protein PE_PGRS20
SCN18_10_11_15_R1_P_scaffold_7_22
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28054..29076)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00036188FB
Uncharacterized protein {ECO:0000313|EMBL:KHK99850.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_7_23
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29766..32318
DNA (2553bp) protein (851aa)
LuxR family transcriptional regulator n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262B279
LuxR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCN18_10_11_15_R1_P_scaffold_7_24
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32665..33402)
DNA (738bp) protein (246aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KJL33710.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KJL33710.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379998C
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
SCN18_10_11_15_R1_P_scaffold_7_25
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33659..34381
DNA (723bp) protein (241aa)
Two-component system response regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XGE3_MICPN
Transcriptional regulatory protein TcrA {ECO:0000313|EMBL:KJL33709.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
two-component system response regulator
SCN18_10_11_15_R1_P_scaffold_7_26
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34374..35507
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EAA90
histidine kinase
SCN18_10_11_15_R1_P_scaffold_7_27
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(35517..36371)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003829B43
Helix-turn-helix protein {ECO:0000313|EMBL:KJL33707.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative DNA-binding protein
SCN18_10_11_15_R1_P_scaffold_7_28
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36473..37234
DNA (762bp) protein (254aa)
Serine 3-dehydrogenase {ECO:0000313|EMBL:KJL33706.1}; EC=1.1.1.276 {ECO:0000313|EMBL:KJL33706.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DltE n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B748E5
short-chain dehydrogenase, teichoic and lipoteichoic acid D-alanine esterification
SCN18_10_11_15_R1_P_scaffold_7_29
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

37402..37800
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348327B
HTH-type transcriptional repressor YtrA {ECO:0000313|EMBL:KJL33705.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_7_30
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

37797..38753
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF7DF
ABC transporter ATP-binding protein YtrB {ECO:0000313|EMBL:KJL33704.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
multidrug ABC transporter ATPase
Displaying items 1-30 of 657 in total

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