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SCN18_10_11_15_R1_P_scaffold_105

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Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_105_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77..337)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C890
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81099.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCN18_10_11_15_R1_P_scaffold_105_2
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

611..2212
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJV8_9MICO
ComEC family competence protein {ECO:0000313|EMBL:KJL17360.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
membrane metal-binding protein
SCN18_10_11_15_R1_P_scaffold_105_3
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2242..3294
DNA (1053bp) protein (351aa)
DNA polymerase III subunit delta n=1 Tax=Microbacterium barkeri RepID=UPI00037C019D
Uncharacterized protein {ECO:0000313|EMBL:KJL17359.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DNA polymerase III, delta subunit
SCN18_10_11_15_R1_P_scaffold_105_4
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(3511..3771)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F2B00
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsT; ribosomal protein S20
SCN18_10_11_15_R1_P_scaffold_105_5
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

3977..5362
DNA (1386bp) protein (462aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
beta-glucosidase n=1 Tax=Brevibacterium linens RepID=UPI00005100BF
beta-glucosidase
SCN18_10_11_15_R1_P_scaffold_105_6
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5359..6642
DNA (1284bp) protein (428aa)
MFS transporter permease n=1 Tax=Brevibacterium linens RepID=UPI00005100C0
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL17356.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
MFS transporter permease
SCN18_10_11_15_R1_P_scaffold_105_7
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6593..7405)
DNA (813bp) protein (271aa)
Arylesterase {ECO:0000313|EMBL:KJL17355.1}; EC=3.1.1.2 {ECO:0000313|EMBL:KJL17355.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003452989
hydrolase or acyltransferase
SCN18_10_11_15_R1_P_scaffold_105_8
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7432..9141)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C44A3
Dipeptide-binding protein DppE {ECO:0000313|EMBL:KJL20087.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
bopA; ABC transporter substrate-binding protein
SCN18_10_11_15_R1_P_scaffold_105_9
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9264..11318)
DNA (2055bp) protein (685aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL17353.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL17353.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L089_9MICO
ABC transporter ATPase
SCN18_10_11_15_R1_P_scaffold_105_10
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11315..12235)
DNA (921bp) protein (307aa)
peptide ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A3DDC
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJL36086.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Oligopeptide transport system permease protein OppC
SCN18_10_11_15_R1_P_scaffold_105_11
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12237..13220)
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW40_9MICO
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KJL17351.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
oppB1; Oligopeptide transport system permease protein
SCN18_10_11_15_R1_P_scaffold_105_12
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13565..15418
DNA (1854bp) protein (618aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
elongation factor 4 n=1 Tax=Microbacterium barkeri RepID=UPI0002E5A1EC
lepA; membrane GTPase LepA
SCN18_10_11_15_R1_P_scaffold_105_13
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15428..16249)
DNA (822bp) protein (274aa)
Putative LysR family transcriptional regulator n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QHP5_9ACTO
Hca operon transcriptional activator {ECO:0000313|EMBL:KJL36083.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
LysR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_105_14
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16383..17294
DNA (912bp) protein (304aa)
Putative amino acid efflux protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QEB6_9ACTO
EamA-like transporter family protein {ECO:0000313|EMBL:KJL36082.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_105_15
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17357..17977
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KVC2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL17347.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_105_16
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17991..19241
DNA (1251bp) protein (417aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KJL17346.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KJL17346.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0C7_9MICO
hemN; coproporphyrinogen III oxidase
SCN18_10_11_15_R1_P_scaffold_105_17
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19269..20711)
DNA (1443bp) protein (481aa)
Carboxylic ester hydrolase {ECO:0000256|RuleBase:RU361235}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361235};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000365411F
carboxylesterase type B
SCN18_10_11_15_R1_P_scaffold_105_18
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20863..21897
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A266B
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator of heat shock gene
SCN18_10_11_15_R1_P_scaffold_105_19
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

21944..23053
DNA (1110bp) protein (370aa)
Chaperone protein DnaJ n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJZ7_9MICO
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain
SCN18_10_11_15_R1_P_scaffold_105_20
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

23059..23787
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496CBE
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_105_21
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

23827..24174
DNA (348bp) protein (116aa)
HIT-like protein {ECO:0000313|EMBL:KJL17341.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL17341.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Hit-like protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9P1_9MICO
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
SCN18_10_11_15_R1_P_scaffold_105_22
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24164..25252
DNA (1089bp) protein (363aa)
Phosphate starvation protein PhoH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR3_9MICO
PhoH-like protein {ECO:0000313|EMBL:KJL17340.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phoH; phosphate starvation-inducible protein PhoH, ATPase
SCN18_10_11_15_R1_P_scaffold_105_23
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

25249..25713
DNA (465bp) protein (155aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
heat-shock protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FAB589
metal-dependent hydrolase
SCN18_10_11_15_R1_P_scaffold_105_24
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

25710..27026
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW53_9MICO
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:KJL17338.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hemolysins
SCN18_10_11_15_R1_P_scaffold_105_25
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

27016..27936
DNA (921bp) protein (307aa)
GTPase Era n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037DCA47
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
era; GTPase
SCN18_10_11_15_R1_P_scaffold_105_26
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

27938..28879
DNA (942bp) protein (314aa)
Quinone oxidoreductase 1 {ECO:0000313|EMBL:KJL17336.1}; EC=1.6.5.5 {ECO:0000313|EMBL:KJL17336.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003174DC9
NADPH:quinone reductase
SCN18_10_11_15_R1_P_scaffold_105_27
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(28887..30677)
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A103
Uncharacterized protein {ECO:0000313|EMBL:KJL17335.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_105_28
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30764..32185)
DNA (1422bp) protein (474aa)
Threonine synthase {ECO:0000313|EMBL:KJL36068.1}; EC=4.2.3.1 {ECO:0000313|EMBL:KJL36068.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
threonine synthase (EC:4.2.3.1)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L3A7_9MICO
SCN18_10_11_15_R1_P_scaffold_105_29
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

32457..34220
DNA (1764bp) protein (588aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
2-isopropylmalate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000311A243
leuA; isopropylmalate/homocitrate/citramalate synthase
SCN18_10_11_15_R1_P_scaffold_105_30
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(34391..35077)
DNA (687bp) protein (229aa)
Membrane protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK09_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36066.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying items 1-30 of 124 in total

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