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SCN18_10_11_15_R5_B_scaffold_610

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_B_scaffold_610_1
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..714
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NXL6_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI10198.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCN18_10_11_15_R5_B_scaffold_610_2
unknown

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comp(535..948)
DNA (414bp) protein (138aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1080..2606)
DNA (1527bp) protein (509aa)
Putative periplasmic oxidoreductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FW8_RHILO
Multicopper oxidase type 3 {ECO:0000313|EMBL:CDX19911.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
oxidoreductase
SCN18_10_11_15_R5_B_scaffold_610_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2756..4081)
DNA (1326bp) protein (442aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Integral membrane sensor signal transduction histidine kinase id=2942034 bin=GWF1_Rhodobacteraceae_65_7 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
integral membrane sensor signal transduction histidine kinase
SCN18_10_11_15_R5_B_scaffold_610_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4078..4815)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000382379F
Transcriptional regulatory protein OmpR {ECO:0000313|EMBL:CEJ14110.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
two component transcriptional regulator
SCN18_10_11_15_R5_B_scaffold_610_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5187..5765
DNA (579bp) protein (193aa)
UPI0003D0087B related cluster n=1 Tax=unknown RepID=UPI0003D0087B
Uncharacterized protein {ECO:0000313|EMBL:ESZ26915.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
cytochrome B561
SCN18_10_11_15_R5_B_scaffold_610_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5827..6306)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ11_XANP2
Uncharacterized protein {ECO:0000313|EMBL:CEJ14111.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_610_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6629..8959
DNA (2331bp) protein (777aa)
Copper-transporting P-type ATPase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I4I9_9SPHN
Silver exporting P-type ATPase {ECO:0000313|EMBL:CEJ12947.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
copA; cation transport ATPase
SCN18_10_11_15_R5_B_scaffold_610_9
unknown

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comp(8848..9066)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_10
bacterium YEK0313, Bacteria

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9229..9564
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ11105.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_610_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9720..10127
DNA (408bp) protein (136aa)
Cytochrome c2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUY5_9RHIZ
Cytochrome c-550 {ECO:0000313|EMBL:CEJ12770.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cytochrome c class I
SCN18_10_11_15_R5_B_scaffold_610_12
unknown

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10892..11119
DNA (228bp) protein (76aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_13
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11810..13090
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Acetobacter pasteurianus 386B RepID=S6DB46_ACEPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCT59736.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus 386B.;"
SCN18_10_11_15_R5_B_scaffold_610_14
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13364..13822)
DNA (459bp) protein (153aa)
Putative copper-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SZ55_9RHIZ
Plastocyanin {ECO:0000313|EMBL:CEJ14113.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative copper oxidase, possibly exported
SCN18_10_11_15_R5_B_scaffold_610_15
unknown

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14343..14777
DNA (435bp) protein (145aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_16
unknown

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15153..15494
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_17
unknown

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comp(15393..15608)
DNA (216bp) protein (72aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_610_18
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15907..16200)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ12_XANP2
Periplasmic copper-binding protein {ECO:0000313|EMBL:CEJ14112.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_610_19
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16226..16684)
DNA (459bp) protein (153aa)
copper oxidase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003820559
Plastocyanin {ECO:0000313|EMBL:CEJ14113.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative copper oxidase, possibly exported
SCN18_10_11_15_R5_B_scaffold_610_20
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16711..18123)
DNA (1413bp) protein (471aa)
copper oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031F9DAE
Copper resistance protein A {ECO:0000313|EMBL:CEJ14114.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
multicopper oxidase type 3
SCN18_10_11_15_R5_B_scaffold_610_21
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18140..19693)
DNA (1554bp) protein (518aa)
Putative TolC-like protein n=1 Tax=Pedomicrobium sp. ACM 3067 RepID=Q2WCM1_9RHIZ
Outer membrane efflux protein {ECO:0000313|EMBL:CEJ14115.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
copper tolerance protein
SCN18_10_11_15_R5_B_scaffold_610_22
unknown

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comp(20255..20503)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 22 items

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