ggKbase home page

SCN18_31_3_15_R4_B_scaffold_3292

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_3292_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2342
DNA (2340bp) protein (780aa)
Apolipoprotein A1/A4/E n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAX7_9RHIZ
Apolipoprotein A1/A4/E
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:AGK57681.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_31_3_15_R4_B_scaffold_3292_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2349..3656)
DNA (1308bp) protein (436aa)
Sun protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSR3_PARL1
16S rRNA m(5)C 967 methyltransferase (EC 2.1.1.-) {ECO:0000313|EMBL:CDO59660.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
sun protein
SCN18_31_3_15_R4_B_scaffold_3292_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3653..4528)
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
heat shock protein HtpX (EC:3.4.24.84)
Protease HtpX homolog n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSM9_9BRAD
SCN18_31_3_15_R4_B_scaffold_3292_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4576..4833
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RYC0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD86947.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_3292_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4916..5479
DNA (564bp) protein (188aa)
Fe-S cluster assembly protein NFU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVV4_GRABC
Mitochondrial type Fe-S cluster assembly protein NFU
Mitochondrial type Fe-S cluster assembly protein NFU {ECO:0000313|EMBL:AHJ61899.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_31_3_15_R4_B_scaffold_3292_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5537..6127
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase Plav_3612 {ECO:0000255|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000255|HAMAP-Rule:MF_01204};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Putative NADH dehydrogenase/NAD(P)H nitroreductase Plav_3612 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=Y3612_PARL1
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_3292_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6140..6859
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035CF21C
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EKS30048.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative protease
SCN18_31_3_15_R4_B_scaffold_3292_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6856..7224
DNA (369bp) protein (123aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EFH09150.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EFH09150.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000369566E
putative ribosomal-protein-alanine acetyltransferase
Displaying 8 items

View Taxonomy