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SCN18_31_3_15_R4_B_scaffold_1478

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1478_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1239)
DNA (1239bp) protein (413aa)
Retinal pigment epithelial membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG44_PHEZH
retinal pigment epithelial membrane protein
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:ACG77168.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_31_3_15_R4_B_scaffold_1478_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1341..1949
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG43_PHEZH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG77167.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_31_3_15_R4_B_scaffold_1478_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1946..2968
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039CB4D6
Uncharacterized protein {ECO:0000313|EMBL:KIF22802.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_1478_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2981..3643)
DNA (663bp) protein (221aa)
PKHD-type hydroxylase G432_04900 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
PKHD-type hydroxylase G432_04900 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SDI2_9SPHN
putative hydroxylase
SCN18_31_3_15_R4_B_scaffold_1478_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3720..5138)
DNA (1419bp) protein (473aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6N4_CAUSK
major facilitator transporter
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_31_3_15_R4_B_scaffold_1478_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5306..6550
DNA (1245bp) protein (415aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPK0_PARL1
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABS61833.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_31_3_15_R4_B_scaffold_1478_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6639..9731)
DNA (3093bp) protein (1031aa)
TonB-dependent receptor n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB38_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EDL48786.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
TonB-dependent receptor
SCN18_31_3_15_R4_B_scaffold_1478_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10210..13146)
DNA (2937bp) protein (979aa)
TonB-dependent receptor n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U403_9PROT
TonB-dependent receptor {ECO:0000313|EMBL:KGB56782.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor
SCN18_31_3_15_R4_B_scaffold_1478_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13519..14412)
DNA (894bp) protein (298aa)
TonB-dependent receptor n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB38_9SPHN
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO38245.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
TonB-dependent receptor
Displaying 9 items

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