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SCN18_31_3_15_R4_B_scaffold_1546

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1546_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..258)
DNA (258bp) protein (86aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRZ2_PARL1
phosphoglucomutase/phosphomannomutase subunit alpha/beta
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:ABS62675.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_31_3_15_R4_B_scaffold_1546_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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465..1340
DNA (876bp) protein (292aa)
Uroporphyrinogen-III methyltransferase n=1 Tax=uncultured bacterium BLR7 RepID=C0INN2_9BACT
Uroporphyrinogen-III methyltransferase {ECO:0000313|EMBL:ACN58918.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
uroporphyrin-III C-methyltransferase
SCN18_31_3_15_R4_B_scaffold_1546_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1706..2602)
DNA (897bp) protein (299aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ABJ06246.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABJ06246.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Enoyl-CoA hydratase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07P88_RHOP5
SCN18_31_3_15_R4_B_scaffold_1546_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2707..2970
DNA (264bp) protein (88aa)
SCN18_31_3_15_R4_B_scaffold_1546_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2963..3418
DNA (456bp) protein (152aa)
PilT-like protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T505_CAUSK
PilT-like protein
PilT-like protein {ECO:0000313|EMBL:ABZ72532.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_31_3_15_R4_B_scaffold_1546_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3422..4579)
DNA (1158bp) protein (386aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDO60172.2}; EC=1.3.8.1 {ECO:0000313|EMBL:CDO60172.2};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Acyl-CoA dehydrogenase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DFD8_9RHIZ
acyl-CoA dehydrogenase
SCN18_31_3_15_R4_B_scaffold_1546_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4691..5308)
DNA (618bp) protein (206aa)
sodB; manganese and iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414, ECO:0000313|EMBL:CAD84781.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Superoxide dismutase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W28_NITEU
SCN18_31_3_15_R4_B_scaffold_1546_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5472..5792)
DNA (321bp) protein (107aa)
Plasmid stabilization system protein n=1 Tax=Erwinia sp. (strain Ejp617) RepID=E3DGW1_ERWSE
plasmid stabilization system protein
Uncharacterized protein {ECO:0000313|EMBL:CAY75922.1}; TaxID=644651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96).;"
SCN18_31_3_15_R4_B_scaffold_1546_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5749..6084)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000363FEBD
Transcriptional regulator {ECO:0000313|EMBL:KIF35006.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transcription regulator
SCN18_31_3_15_R4_B_scaffold_1546_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6146..7516)
DNA (1371bp) protein (457aa)
Aminotransferase, class III n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RM39_9RHIZ
Aminotransferase, class III {ECO:0000313|EMBL:ESR27081.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
class III aminotransferase
SCN18_31_3_15_R4_B_scaffold_1546_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7580..8902)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C311F
Ribose transport system substrate-binding protein {ECO:0000313|EMBL:ERF83590.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
citrate:proton symporter
SCN18_31_3_15_R4_B_scaffold_1546_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9044..9448)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7U3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW32197.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
thioesterase superfamily protein
SCN18_31_3_15_R4_B_scaffold_1546_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9598..11043)
DNA (1446bp) protein (482aa)
Amino acid permease family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QHS3_9CAUL
Amino acid permease family protein {ECO:0000313|EMBL:EGF92810.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
amino acid permease
SCN18_31_3_15_R4_B_scaffold_1546_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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11317..12951
DNA (1635bp) protein (545aa)
Putative acyl-CoA synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I027_9RHIZ
Putative acyl-CoA synthetase {ECO:0000313|EMBL:EHK53668.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AMP-dependent synthetase and ligase
SCN18_31_3_15_R4_B_scaffold_1546_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12961..13725
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E092_THIND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA34046.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Displaying 15 items

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