ggKbase home page

SCN18_31_3_15_R4_B_scaffold_1795

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_1795_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130..480
DNA (351bp) protein (117aa)
SCN18_31_3_15_R4_B_scaffold_1795_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(522..1769)
DNA (1248bp) protein (416aa)
acyl-CoA dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034AFCE2
Acyl-CoA dehydrogenase-like
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_31_3_15_R4_B_scaffold_1795_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1786..2907)
DNA (1122bp) protein (374aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZF6_HYPNA
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:KDA00016.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
acyl-CoA dehydrogenase family protein
SCN18_31_3_15_R4_B_scaffold_1795_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..4260)
DNA (1248bp) protein (416aa)
PREDICTED: cytochrome P450 55A3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14A15
p450; cytochrome P450
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_31_3_15_R4_B_scaffold_1795_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4412..5614)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYV6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95629.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
SCN18_31_3_15_R4_B_scaffold_1795_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5611..6291)
DNA (681bp) protein (227aa)
ABC transporter related id=2096212 bin=GWB2_Desulfobacterales_56_26 species=Shewanella frigidimarina genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter
Tax=GWB2_Desulfobacterales_56_26_curated
SCN18_31_3_15_R4_B_scaffold_1795_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6318..7526)
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6R9_9NEIS
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEG07644.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
RND family efflux transporter MFP subunit
SCN18_31_3_15_R4_B_scaffold_1795_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7645..7857)
DNA (213bp) protein (71aa)
SCN18_31_3_15_R4_B_scaffold_1795_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7921..8817)
DNA (897bp) protein (299aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A637_METMM
alpha/beta hydrolase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCN18_31_3_15_R4_B_scaffold_1795_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9449)
DNA (609bp) protein (203aa)
uracil-DNA glycosylase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039FAA65
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:GAK45221.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
uracil-DNA glycosylase
SCN18_31_3_15_R4_B_scaffold_1795_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9449..10597)
DNA (1149bp) protein (383aa)
PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AE71
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45220.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
acyl-CoA dehydrogenase
SCN18_31_3_15_R4_B_scaffold_1795_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..11243)
DNA (564bp) protein (188aa)
SCN18_31_3_15_R4_B_scaffold_1795_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11289..12065
DNA (777bp) protein (259aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS13_PARL1
Luciferase family protein {ECO:0000313|EMBL:GAK45218.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
luciferase family protein
Displaying 13 items

View Taxonomy