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SCN18_31_3_15_R4_B_scaffold_889

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R4_B_scaffold_889_1
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..447
DNA (447bp) protein (149aa)
Integrase catalytic region n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X663_CELAD
Integrase {ECO:0000313|EMBL:KGO83519.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
integrase
SCN18_31_3_15_R4_B_scaffold_889_2
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(490..1395)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B56D5C
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08014.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_889_3
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1731..1964
DNA (234bp) protein (78aa)
SCN18_31_3_15_R4_B_scaffold_889_4
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2010..3974
DNA (1965bp) protein (655aa)
Putative signal transduction histidine kinase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FU92_9FLAO
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EIA08016.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
signal transduction histidine kinase
SCN18_31_3_15_R4_B_scaffold_889_5
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3986..4642
DNA (657bp) protein (219aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DC6D3B
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10501.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
response regulator receiver protein
SCN18_31_3_15_R4_B_scaffold_889_6
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4786..5838
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPU3_FLAIG
Restriction endonuclease or methylase {ECO:0000313|EMBL:KIA87724.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_889_7
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5825..6334
DNA (510bp) protein (170aa)
SH3 type 3 domain-containing protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XA10_FLACA
SH3 type 3 domain-containing protein
SH3 type 3 domain-containing protein {ECO:0000313|EMBL:AEW85174.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
SCN18_31_3_15_R4_B_scaffold_889_8
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6358..6768
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5R5_9FLAO
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22398.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_889_9
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6772..8040
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3BY97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA92718.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_889_10
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8045..8941
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KNI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99692.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCN18_31_3_15_R4_B_scaffold_889_11
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9008..9811
DNA (804bp) protein (268aa)
Deoxyribonuclease gamma n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDW9_9FLAO
Endonuclease {ECO:0000313|EMBL:KIA87723.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Endonuclease/exonuclease/phosphatase precursor
SCN18_31_3_15_R4_B_scaffold_889_12
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9894..10382
DNA (489bp) protein (163aa)
SCN18_31_3_15_R4_B_scaffold_889_13
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10478..10951
DNA (474bp) protein (158aa)
SCN18_31_3_15_R4_B_scaffold_889_14
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11269..11946
DNA (678bp) protein (226aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EC13_9SPHI
PAS sensor protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCN18_31_3_15_R4_B_scaffold_889_15
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12014..12361)
DNA (348bp) protein (116aa)
RRM domain-containing RNA-binding protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0D9_9FLAO
RNA-binding protein {ECO:0000313|EMBL:KIX19687.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
RNP-1 like RNA-binding protein
SCN18_31_3_15_R4_B_scaffold_889_16
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12850..13494
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B644A8
Uncharacterized protein {ECO:0000313|EMBL:KGO79287.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
transcriptional regulator
SCN18_31_3_15_R4_B_scaffold_889_17
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13500..16508)
DNA (3009bp) protein (1003aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B48FF0
Uncharacterized protein {ECO:0000313|EMBL:KGO79288.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
uncharacterized protein
SCN18_31_3_15_R4_B_scaffold_889_18
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16720..17703
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FYQ6_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEI91942.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
DNA-binding domain-containing protein
SCN18_31_3_15_R4_B_scaffold_889_19
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17718..18779
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZD9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60927.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
Helix-turn-helix domain
SCN18_31_3_15_R4_B_scaffold_889_20
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19021..23469
DNA (4449bp) protein (1483aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B3A235
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACU04797.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying 20 items

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