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SCN18_14_9_16_R3_B_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 648 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R3_B_scaffold_5_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(195..932)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A n=1 Tax=Niabella soli DSM 19437 RepID=H1NR42_9SPHI
tRNA pseudouridine synthase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_5_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(937..1842)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364C960
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17577.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_14_9_16_R3_B_scaffold_5_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2019..4481
DNA (2463bp) protein (821aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB30_NIAKG
Peptidase M1 membrane alanine aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_5_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4546..5886)
DNA (1341bp) protein (447aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KIC93185.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KIC93185.1};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acetyl-CoA carboxylase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00036CA828
acetyl-CoA carboxylase, biotin carboxylase
SCN18_14_9_16_R3_B_scaffold_5_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5977..6465)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381927E
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_5_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6620..7186)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA0_NIAKG
translation elongation factor P (EF-P)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_5_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7343..7501
DNA (159bp) protein (53aa)
SCN18_14_9_16_R3_B_scaffold_5_trna_1
unknown

Not on your lists

7395..7466
DNA (72bp)
transferRNA Glu
SCN18_14_9_16_R3_B_scaffold_5_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7957..9360
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AC665
Uncharacterized protein {ECO:0000313|EMBL:EYA18965.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9360..9713
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6I8_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EYA18966.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9717..10268
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKT2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EYA18967.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10485..10673)
DNA (189bp) protein (63aa)
SCN18_14_9_16_R3_B_scaffold_5_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10678..11592)
DNA (915bp) protein (305aa)
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
SCN18_14_9_16_R3_B_scaffold_5_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11589..11939)
DNA (351bp) protein (117aa)
SCN18_14_9_16_R3_B_scaffold_5_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11929..12243)
DNA (315bp) protein (105aa)
DNA binding domain, excisionase family n=1 Tax=Alistipes sp. HGB5 RepID=E4MDZ9_9BACT
hypothetical protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFR56843.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SCN18_14_9_16_R3_B_scaffold_5_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12448..12603
DNA (156bp) protein (52aa)
SCN18_14_9_16_R3_B_scaffold_5_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12635..13612)
DNA (978bp) protein (326aa)
SCN18_14_9_16_R3_B_scaffold_5_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13614..14837)
DNA (1224bp) protein (408aa)
Tyrosine type site-specific recombinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GNV3_9BACT
tyrosine type site-specific recombinase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
SCN18_14_9_16_R3_B_scaffold_5_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15216..16427)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZP85_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON75926.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16424..18190)
DNA (1767bp) protein (589aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2A5_9SPHI
ABC transporter related protein {ECO:0000313|EMBL:EHQ27885.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
multidrug ABC transporter ATPase/permease
SCN18_14_9_16_R3_B_scaffold_5_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18451..18744
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2A9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27889.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18783..19202
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2A8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27888.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19368..19913
DNA (546bp) protein (182aa)
Tail Collar domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNC2_CHIPD
hypothetical protein
Tail Collar domain protein {ECO:0000313|EMBL:ACU62332.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_14_9_16_R3_B_scaffold_5_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19949..20530
DNA (582bp) protein (194aa)
Tail Collar domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNC3_CHIPD
hypothetical protein
Tail Collar domain protein {ECO:0000313|EMBL:ACU62333.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_14_9_16_R3_B_scaffold_5_24
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20585..21136
DNA (552bp) protein (184aa)
Tail Collar domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNC4_CHIPD
Microcystin-dependent protein {ECO:0000313|EMBL:EXG77861.1}; TaxID=915438 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oryzae DSM 17970.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_5_25
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21332..22084)
DNA (753bp) protein (251aa)
Methyltransferase type 12 n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZVK8_METMM
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEG01990.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SCN18_14_9_16_R3_B_scaffold_5_26
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22139..24025
DNA (1887bp) protein (629aa)
Asparagine synthase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2B8_9SPHI
Asparagine synthase {ECO:0000313|EMBL:EHQ27898.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
asparagine synthase
SCN18_14_9_16_R3_B_scaffold_5_27
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24078..24203
DNA (126bp) protein (42aa)
SCN18_14_9_16_R3_B_scaffold_5_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24256..25110)
DNA (855bp) protein (285aa)
Sulfotransferase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2B1_9SPHI
Sulfotransferase {ECO:0000313|EMBL:EHQ27891.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sulfotransferase
SCN18_14_9_16_R3_B_scaffold_5_29
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25112..26014)
DNA (903bp) protein (301aa)
HPr kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2B0_9SPHI
HPr kinase {ECO:0000313|EMBL:EHQ27890.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
HPr kinase
Displaying items 1-30 of 648 in total

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