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SCN18_14_9_16_R3_B_scaffold_3_20

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25284..28700

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 1134.0
  • Bit_score: 1842
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 1147.0
  • Bit_score: 1735
  • Evalue 0.0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 1145.0
  • Bit_score: 1828
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3417
ATGAACCTGGGTTTGTTGTTAGAAAAATATCAGCAAGATACCCGCCTTTTCCAGTTGGCGGACAGGCTATCCTTTGCCAGGGGTTTACAGGAAAATGATGCTCAAAAAATTTATCTGAAAAACTTGTTAGGCAGCAGCACAGAGTTTGTTGTAGCATCTGTTTTCAATCATCCATCCGCAAAAGAAATAAATCACCTGGTAGTGTTAAACGATGCTGAAGAAGCGGCCTATTTTCATAATACCCTTGAAAACCTCACTTCAGCCCTTGATCTTTTTTATTTTCCTTCCTCATTCAAAAACAGGAAAAATTTTCGTTTACTCAACTCTTCGCATGTAATGCTGCGTACAGAAATGTTAACCAAACTTTCTATTGGCGGTAATCGGAAAATAATCATCACTTACCCTGAAGCGCTGTTTGAGAAAGTGGTATTGCCAAGAACGTTGAGCAGCAATATTATTCAGATTAAAACAAACGATACAATTAACCTGGACAGTTTGATGGAGTTGTTTGTGATGTATGGATTTGAGAGAACAGATTTTGTGTATGAACCGGGGCAGTTTGCTTTACGTGGCGGCATACTGGATATTTATTCTTTTGGGAACGAGAAACCATATAGGGTTGAGTTGTTTGGCAATGAAGTAGACAGCATCAGGATATTTGATCCGGAAACACAACTGAGCGAAAGAAAATTGTTGCAGGTTTCTATCATTCCGAATGTGGAAACGCAATTTGAAAGTGGGGAGAAAGTAACGTTGTTAGAATTTCTTCCGGAGAATACTATTGTATGGTTGAAAGATTGGGATGTGATCAAAGAAAAAATTGAAGTACAGGAAGAAGATCTGGGAATGTTTTTGGAACGGTCAACAGTCAATGGTCAACAGTCAACAGAAGAAGATGAGGAAGACGATACAAAAATTTTAAAAGAAGTTTCGTTACAGGACTTTGTTCCTGCTGCAACGATTCAACGACAAATTCAACAACGACATTTAATTGAATTCGGTTACAAATCTCATTTATCCAATGTTGAAATTGAGTTCAAAACAAAATCGCAACCTTCATTCAACAGGCAGTTCGATTTATTGATAAAAGACCTGAAAGCTCATGAGGCTGCAGGCTTCAGCATTTTTATTTTCGCTGAACAATCAAGGCAATTGGAAAGATTGTATTCCATCTTTAAAGACCTGAATACAGAAATTCAATTCACACAAATTGCAACATCTATTCACGAAGGTTTTATTGATGATGACCTGAAAATTGTTTGTTATACTGATCATCAGATATTTCAGCGTTATCACAAATACAGAGTTAAGCAGGCATACAATAAAAACAAAGCACTTACTTTAAAAACATTGCGTGATTTACAGCCGGGAGATTTTGTAACGCATCTTGATCATGGTGTTGGAAGATACAGCGGTTTGCAAAAATTAGAAGTGAATGGCAAGTTGCAGGAAGCAGTAAGAATTATTTATAAAGACAGCGATATTTTATATGTTAATATCAATTCGCTGCATAAGATTTCTAAATACACCGGTAAAGACGGAACGGAACCCAAGATTAATAAATTAGGTAGTGATGTTTGGAATAAACTGAAAGAGAAAACCAAAACCAAAGTAAAAGAAATTGCTTTCGATTTAATTAAACTGTACGCTCAACGAAAGGCACAACAAGGCTTTCAGCACATGCCGGATAATTATTTGCAAACAGAATTGGAAGCAAGTTTTATTTATGAAGACACTCCCGATCAAAGCAAAGCAACTGCCGATGTGAAGAAAGACATGGAATCTCCTTCGCCAATGGATAGGCTGGTTTGCGGGGATGTTGGTTTTGGTAAAACAGAAATTGCTATTCGTGCAGCCTTCAAAACCTGTTGCGATGGTAAACAGGCTGCGGTGCTTGTTCCAACAACAATTTTGGCGTATCAACATTATCAAACTTTTAAAAACAGGCTAAGAGATTTTCCAATTACGGTAGATTATATCAACCGGTTCAAATCGTCTAAAGAAAAAAAAGAAACACTTCAAAAATTATCGGAAGGTAAAATTGATATCATAGTTGGAACACATGGCTTATTGGGAAAAGATGTGAAGTTTAAAGATTTGGGTTTGATGGTAATTGATGAAGAACAAAAATTTGGTGTTGCACATAAAGAAAAACTGAAACTCTTAAAAACAAATGTTGATTCGCTAACGCTTACGGCTACCCCAATTCCCAGAACATTACAATTTAGTTTAATGGGTGCAAGGGACCTGAGTATTATTAATACGCCGCCGCCTAATCGCCAACCCATTCAAACGGAAGTGAATGTTTTTAACGATGATTTTATTAGAGATGCCATTTATTTTGAAACAGAAAGAGGCGGGCAGGTTTTCTTTATTCACAATCGTGTGCAGGGCCTGCAGGAAATGTGTGGCTTAATTCAAGCCTTATGCCCTGATTTAAGTATCTCTTATGCCCACGGGCAAATGGATGGAGACCAACTGGAAGAAAGGATTTTAGATTTTATTGATAAAAAATATGATGTATTGGTTTGTACCAATATTGTTGAAAGCGGAGTAGATATTCCGAACGTAAATACCATCATTGTTAATAATGCACATCAGTTTGGGCTGAGCGATCTGCACCAATTACGTGGAAGAGTAGGAAGAAGTAATAAAAAAGCATTCTGTTATTTGTTGGCGCCACCCATGAGTACATTACCCACAGACTCCAGGAAACGCCTGCAAACATTGGAACAGTTCAGCGATTTGGGAAGTGGCTTCCAGATTGCCATGCGAGACCTGGACATTCGCGGTGCCGGAAATATGTTGGGAGGCGAGCAAAGTGGTTTTATGGCAGAAATTGGTTTTGAAATGTACCAGAAAATATTAGACGAAGCCATCAGGGAACTGAAACGTACTGCTTTTAAAGACCTCTTTCAGGAAGAAATATCTAAGCAGGACGATTTTGTGAGTGATTGTACAATTGATACCGATCTGGAAATACTGATTCCCGATAGTTATGTAGAGAGTATAACAGAACGGTTATCGCTCTATACGCGTTTAGATAATTGTGAGAATGAAAAAACATTACAAGATTTTCACGAAGAATTGATTGACCGCTTTGGGCCGATTCCGCAGGAAGTAGAAGATCTCTTTACTACTGTAAAATGCCGCTGGGCTGCAGTGGAGCTGGGCTTTGAAAAAATGGCACTGAAAGAGGAAACACTAAGATGTTATTTCATTAATAAAAACGACTCTCCGTATTTTGAAAGCAACCTGTTTAAAAACATTCTTCAATACCTGCAAACAGGTACTAACAAAGCCAGGTTAAAACAGGTGGCCAAAAACTTTTTATTGGTAGTGGATGATATTAAGGATATGGAAGCTATGCTACGGTTCCTGCAACGCATGCGGGAGCATGTTTGTACGCCTAAATAG
PROTEIN sequence
Length: 1139
MNLGLLLEKYQQDTRLFQLADRLSFARGLQENDAQKIYLKNLLGSSTEFVVASVFNHPSAKEINHLVVLNDAEEAAYFHNTLENLTSALDLFYFPSSFKNRKNFRLLNSSHVMLRTEMLTKLSIGGNRKIIITYPEALFEKVVLPRTLSSNIIQIKTNDTINLDSLMELFVMYGFERTDFVYEPGQFALRGGILDIYSFGNEKPYRVELFGNEVDSIRIFDPETQLSERKLLQVSIIPNVETQFESGEKVTLLEFLPENTIVWLKDWDVIKEKIEVQEEDLGMFLERSTVNGQQSTEEDEEDDTKILKEVSLQDFVPAATIQRQIQQRHLIEFGYKSHLSNVEIEFKTKSQPSFNRQFDLLIKDLKAHEAAGFSIFIFAEQSRQLERLYSIFKDLNTEIQFTQIATSIHEGFIDDDLKIVCYTDHQIFQRYHKYRVKQAYNKNKALTLKTLRDLQPGDFVTHLDHGVGRYSGLQKLEVNGKLQEAVRIIYKDSDILYVNINSLHKISKYTGKDGTEPKINKLGSDVWNKLKEKTKTKVKEIAFDLIKLYAQRKAQQGFQHMPDNYLQTELEASFIYEDTPDQSKATADVKKDMESPSPMDRLVCGDVGFGKTEIAIRAAFKTCCDGKQAAVLVPTTILAYQHYQTFKNRLRDFPITVDYINRFKSSKEKKETLQKLSEGKIDIIVGTHGLLGKDVKFKDLGLMVIDEEQKFGVAHKEKLKLLKTNVDSLTLTATPIPRTLQFSLMGARDLSIINTPPPNRQPIQTEVNVFNDDFIRDAIYFETERGGQVFFIHNRVQGLQEMCGLIQALCPDLSISYAHGQMDGDQLEERILDFIDKKYDVLVCTNIVESGVDIPNVNTIIVNNAHQFGLSDLHQLRGRVGRSNKKAFCYLLAPPMSTLPTDSRKRLQTLEQFSDLGSGFQIAMRDLDIRGAGNMLGGEQSGFMAEIGFEMYQKILDEAIRELKRTAFKDLFQEEISKQDDFVSDCTIDTDLEILIPDSYVESITERLSLYTRLDNCENEKTLQDFHEELIDRFGPIPQEVEDLFTTVKCRWAAVELGFEKMALKEETLRCYFINKNDSPYFESNLFKNILQYLQTGTNKARLKQVAKNFLLVVDDIKDMEAMLRFLQRMREHVCTPK*