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SCN18_14_9_16_R3_B_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 748 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R3_B_scaffold_3_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..186
DNA (186bp) protein (62aa)
SCN18_14_9_16_R3_B_scaffold_3_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(269..1285)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382A239
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU64405.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_14_9_16_R3_B_scaffold_3_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1419..3272
DNA (1854bp) protein (618aa)
beta-galactosidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7A5DA
beta-galactosidase
Beta-galactosidase {ECO:0000313|EMBL:AKD02294.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCN18_14_9_16_R3_B_scaffold_3_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3360..4721)
DNA (1362bp) protein (454aa)
Alpha-N-acetylgalactosaminidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR04_NIAKG
Glycosyl hydrolase family 109 {ECO:0000313|EMBL:ETZ22519.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Alpha-N-acetylgalactosaminidase
SCN18_14_9_16_R3_B_scaffold_3_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4788..5858)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E2756
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADY54227.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCN18_14_9_16_R3_B_scaffold_3_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5989..7485)
DNA (1497bp) protein (499aa)
Amine oxidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5J4_9BACT
amine oxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7600..8043
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CE14_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KIC90731.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
N-acetyltransferase GCN5
SCN18_14_9_16_R3_B_scaffold_3_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8303..10813)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6D4_OWEHD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10948..13923)
DNA (2976bp) protein (992aa)
excinuclease ABC subunit A n=1 Tax=Segetibacter koreensis RepID=UPI000380332E
excinuclease ABC subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14217..15473
DNA (1257bp) protein (419aa)
homoserine dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036B6E30
homoserine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15505..16170
DNA (666bp) protein (222aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KY01_SOLCM
membrane-associated phospholipid phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16253..16381
DNA (129bp) protein (43aa)
SCN18_14_9_16_R3_B_scaffold_3_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16592..17368
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037054F2
Enoyl-CoA hydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17380..17811)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D74F
Acetyltransferase {ECO:0000313|EMBL:KIC89199.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
N-acetyltransferase GCN5
SCN18_14_9_16_R3_B_scaffold_3_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17938..19293
DNA (1356bp) protein (452aa)
peptidase M28 n=1 Tax=Segetibacter koreensis RepID=UPI0003732FB1
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AFK05219.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCN18_14_9_16_R3_B_scaffold_3_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19300..19941
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Endonuclease III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM2_NIAKG
endonuclease III
SCN18_14_9_16_R3_B_scaffold_3_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20052..20777)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370C800
Oxidoreductase {ECO:0000313|EMBL:KIC96151.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
SCN18_14_9_16_R3_B_scaffold_3_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20907..24704)
DNA (3798bp) protein (1266aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0A6_9SPHI
subtilisin-like serine protease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24768..25235
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036CCB71
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25284..28700
DNA (3417bp) protein (1139aa)
transcription-repair coupling factor n=1 Tax=Segetibacter koreensis RepID=UPI00037008A6
transcription-repair coupling factor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29142..29654)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAK35652.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
SCN18_14_9_16_R3_B_scaffold_3_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29905..30267
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EDA90
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEV99116.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_14_9_16_R3_B_scaffold_3_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30317..31681)
DNA (1365bp) protein (455aa)
Trigger factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU1_NIAKG
trigger factor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_trna_15
unknown

Not on your lists

comp(31779..31860)
DNA (82bp)
transferRNA Leu
SCN18_14_9_16_R3_B_scaffold_3_24
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31991..32746)
DNA (756bp) protein (252aa)
geranylgeranylglyceryl phosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037CAC12
geranylgeranylglyceryl phosphate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_25
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33193..36576
DNA (3384bp) protein (1128aa)
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI000367D1A5
ribonucleoside-diphosphate reductase class II
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_3_26
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36754..37206)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9C4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC59951.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_3_27
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37438..38601
DNA (1164bp) protein (388aa)
SCN18_14_9_16_R3_B_scaffold_3_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38632..39252
DNA (621bp) protein (207aa)
SCN18_14_9_16_R3_B_scaffold_3_29
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39322..39876
DNA (555bp) protein (185aa)
Polyisoprenoid-binding protein {ECO:0000313|EMBL:KIF43614.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
hypothetical protein
YceI family protein id=3854582 bin=GWF2_Bacteroidetes_38_335 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Displaying items 1-30 of 748 in total

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