ggKbase home page

SCN18_14_9_16_R3_B_scaffold_3_25

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 33193..36576

Top 3 Functional Annotations

Value Algorithm Source
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI000367D1A5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 1129.0
  • Bit_score: 1851
  • Evalue 0.0
ribonucleoside-diphosphate reductase class II similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 1134.0
  • Bit_score: 1839
  • Evalue 0.0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 1132.0
  • Bit_score: 1924
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3384
ATGGCTAACCCAAAAACAAACAAAGGCTTACAGTTCGCCCGTCGCTTTACCAAAGAAGGTGTAAGCGTTTTCGATTTGTTCGATTACGATTACAGAACCAGTATTATTAAAAACCCAACGGGGGAAACTGTGTTTGAAATGAATAATGTAGAAGTGCCCAAACAATGGAGCCAGATAGCTACAGATATTCTTGCACAAAAATATTTTCGTAAAGCCGGCGTACCACAACCCGATGGCAGTTTGGGAAGAGAAACCTCGGTTAAACAGGTAGCACACCGTATGGCTAATTGCTGGAGGGTTTGGGGTGAACGTTACGAATATTTTGCTTCACCTAAAGATGCGCAGGTTTTTTACGATGAATTGGTATATAGCATACTAAACCAATCCTGTGTTCCCAATTCTCCGCAATGGTTTAATACAGGCCTGCACGAAAGCTATGGTATTACCGGTAAACCTCAAGGCCATTATTATGTTGATCCGGTAGATGGTGAACTGAAAAAATCTAAAAATGCATATGAGCGCCCTCAACCACATGCATGTTTTATTTTAAGTGTGAATGATGATTTGGTGAACGAAGGCGGTATCATGGATCTTTGGGTTAGAGAGGCCAGGATATTTAAATATGGAAGTGGTGTGGGAACCAACTTTTCACAAATACGCGGTACCGGTGAAAAATTGAGTGGAGGCGGATCGTCTAGCGGATTGATGAGTTTCTTAAAAATAGGAGATAGGGCAGCCGGAGCGATTAAATCTGGTGGTACTACCCGCCGTGCAGCCAAAATGGTTTGTCTTGATTTAGACCATCCAGAAGTAATGGAATTCATTAACTGGAAAGTGGAAGAAGAAAAGAAAGTAGGCGCATTAATTGCTGCCGGTTATGATTCTCATTATGAAGGTGAAGCTTATTTAACGGTATCTGGCCAAAATTCAAATAACTCCGTTCGTATTCCTAATTCATTTTTTGAGAAACTGGAAAAAAATGAAGATTGGGAATTAAAAGCAAGAACAGATGGCAGAGTAATGAAAAAAATCCCGGCACGAGAAGTATGGAAACAAATTTCTTATGCGGCCTGGCGTTGTGCAGATCCGGGAACACAATACGATACTACTATTAATGAATGGCATACCTGTCCGAAAGGAGGTCGCATCAATGCATCTAATCCGTGCAGCGAATATATGTTCCTGGATAATACTGCCTGCAACCTGGCTTCTATTAATCTGCGCAAATTCTTCAATGAAGAAACTAATCTGTTAGATGTGGAAGGGTTGGAATACATCAGCCGTTTATGGACCACTGTTTTAGAAATAAGCGTATTAATGGCTCAATTTCCTTCAAAAGAAGTTGCACAATTAAGTTACGATTACAGAACACTGGGTTTGGGCTTTGCCAATCTTGGTACTATTTTAATGTTAAGCGGTATTTCTTACGATAGTGAAGAGGCACGTGGTATTGCAGGTGCCGTTAGTGCGATAATGACCGGAGTGGCATATAAAACATCTGCGGAAATGGCCTCATTTCTTGGAGCGTTCCCCAGGTACGAAGAAAATAAAGAAGATATGTTGCGTGTAATGCGTAACCACCGTGCTGCTGCTTATGATGCAGAAGAGGCTTATGTTGGATTGAGTGTGAAACCCGTAGGTATTAAAGCAAAATACTGCCCCGATTTTTTATTGAAGGCCGCAACCAAAGCATGGGACGATGCCGTGAAACTTGGAGAAAAATACGGTTATAGAAATGCACAAACAACTGTAATTGCACCAACCGGAACCATTGGCTTGGTAATGGATTGTGATACAACAGGTGTTGAGCCGGACTTTGCTTTGGTGAAATTTAAAAAATTAAGTGGTGGCGGTTATTTCAAAATCATCAATGGGGCTGTTCCTAATGCGCTAAAAACATTAGGGTACAAACAAAATGAAATTGATGCAATTGAAAAATATGCAGTAGGTGCTGCAAATTTTGAAGGCGCTCCATTCATTAATCCAAGCTCACTAAGTGAAAAAGGATTTACTGCTGAAGAGATAGCCAAATTAAATGCTGCTGCAAAGACAGCCTTCGAAATTGGCTTTGTGTTCAACAGGTTTATTTTGGGTGAAGCTTGTTTACAACGTTTAGGATTTACAGAGGAAGAATACACAGACTGGAGCTTTAATATGTTAGAAGCTTTAGGTTTTACTGAAGAACAGATTGAAGCTGCAAATGATTATGTGTGTGGAACCATGACCGTTGAAGGTGCTCCTTATTTGAAAGAAGAACATTTACCTGTTTTTGATTGTGCTAATAAATGCGGCAAGAAAGGAGAAAGGTATATTCATGCACATGGCCATATTAAAATGATGGCAGCCTGCCAGCCTTTTTTAAGTGGCGCTATTTCTAAAACGATTAATCTTCCGCATGAAGCTTCTATTGAAGAAATTGAAGATAGTTACATGCTTAGCTGGCAATTAGGATTGAAAGCTTGTGCATTGTATAGAGACGGATCTAAACTTTCTCAGCCATTGAGCAACAAATCCGATAAAAAGAAAAAATCTGCTGAAGATAGCCAACAGACAATAGAAGAAAATAAAACAACAGAAGAGCATGAGGCAGTAACCTCTTCAGAAAGCAATATAGTAGACCTCAGTAAAATATCTGTAGAAGATTTATTGGAAGAAGTGAACAGAAGAATGGCAGCTTCTACGGATACAACATTTAAAAGGCAACTATCTCGTATTGTAGAAAGAAAATCTTTACCTGCAAAACGAAGAGGTTTTACACAGAAAGCGAAAATAAATGGCCAGGTATTGTTCTTAAGAACGGGCGAATACGGAGACGGAACATTGGGAGAGATCTTTATAGACCTTGCTAAAGAAGGCTCTACTGTAAGAAGCCTGATGAACTGTTTTGCAATTGCCATTTCTGTAGGATTGCAATATGGTGTGCCTTTGGAAGAGTTTGTTGAGAAATTTGTGTTTACCCGTTTTGAACCTGCCGGAATGGTAGATCACCCGAATATTAAAACAACCACTTCTTTGGTAGATTTTGTTTTCCGTGCATTAGCTTACGAATATTTGGGAAGAACAGATTTGGTACATGTATTAGACAAACCAGAAATAGGCAATACTGGCAATGACGATGGTGAAATAAGTTATTTAGGCGGCACACCGGAATTAAGCAGTATACATGTTACGGCAAGCGCCAATACAACGCCTGCTGCTACTACACAGCCGCAAAAATTACAAAGAGCTTCCGTTAAAACAGAAAGCGGGCTGGATATGGTAAATGCAGCTGCCAAAAACATGCAAAGCGATGCGCCAGCCTGTAATACCTGTGGCCATATTACCATTCGCAGCGGTACTTGTTACAAATGCTTAAACTGCGGTAACAGTATGGGATGCAGTTAA
PROTEIN sequence
Length: 1128
MANPKTNKGLQFARRFTKEGVSVFDLFDYDYRTSIIKNPTGETVFEMNNVEVPKQWSQIATDILAQKYFRKAGVPQPDGSLGRETSVKQVAHRMANCWRVWGERYEYFASPKDAQVFYDELVYSILNQSCVPNSPQWFNTGLHESYGITGKPQGHYYVDPVDGELKKSKNAYERPQPHACFILSVNDDLVNEGGIMDLWVREARIFKYGSGVGTNFSQIRGTGEKLSGGGSSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVCLDLDHPEVMEFINWKVEEEKKVGALIAAGYDSHYEGEAYLTVSGQNSNNSVRIPNSFFEKLEKNEDWELKARTDGRVMKKIPAREVWKQISYAAWRCADPGTQYDTTINEWHTCPKGGRINASNPCSEYMFLDNTACNLASINLRKFFNEETNLLDVEGLEYISRLWTTVLEISVLMAQFPSKEVAQLSYDYRTLGLGFANLGTILMLSGISYDSEEARGIAGAVSAIMTGVAYKTSAEMASFLGAFPRYEENKEDMLRVMRNHRAAAYDAEEAYVGLSVKPVGIKAKYCPDFLLKAATKAWDDAVKLGEKYGYRNAQTTVIAPTGTIGLVMDCDTTGVEPDFALVKFKKLSGGGYFKIINGAVPNALKTLGYKQNEIDAIEKYAVGAANFEGAPFINPSSLSEKGFTAEEIAKLNAAAKTAFEIGFVFNRFILGEACLQRLGFTEEEYTDWSFNMLEALGFTEEQIEAANDYVCGTMTVEGAPYLKEEHLPVFDCANKCGKKGERYIHAHGHIKMMAACQPFLSGAISKTINLPHEASIEEIEDSYMLSWQLGLKACALYRDGSKLSQPLSNKSDKKKKSAEDSQQTIEENKTTEEHEAVTSSESNIVDLSKISVEDLLEEVNRRMAASTDTTFKRQLSRIVERKSLPAKRRGFTQKAKINGQVLFLRTGEYGDGTLGEIFIDLAKEGSTVRSLMNCFAIAISVGLQYGVPLEEFVEKFVFTRFEPAGMVDHPNIKTTTSLVDFVFRALAYEYLGRTDLVHVLDKPEIGNTGNDDGEISYLGGTPELSSIHVTASANTTPAATTQPQKLQRASVKTESGLDMVNAAAKNMQSDAPACNTCGHITIRSGTCYKCLNCGNSMGCS*