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SCN18_14_9_16_R3_B_scaffold_5_47

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(44357..45466)

Top 3 Functional Annotations

Value Algorithm Source
Rhamnogalacturonides degradation protein RhiN n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GRL3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 343.0
  • Bit_score: 433
  • Evalue 1.70e-118
Rhamnogalacturonides degradation protein RhiN {ECO:0000313|EMBL:EOR94155.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 343.0
  • Bit_score: 433
  • Evalue 2.30e-118
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 347.0
  • Bit_score: 413
  • Evalue 3.80e-113

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCGTAAGAATACAGCATTACTGCTGATAGCCTCCGTTATTTTTTTCGGTTCTGTAAAAGCGCAGTATACCTATTCTGCAAATTCTGTTAAGCAGGTTATGAAAAAAGTTGCCGACTGGCAATTGAATACCTGGGCTGAAAAAGGAATGAAAGCTGCAAAATGGGATTGGACAAATGCCACTGCCTACGCCGGCTTTATGGCTTTTGATAAAATTGCAAACGATAGCACTTATTGCAAAGCCATGTATGCAATTGGAGAAGCTTTACAATGGAATACGGGACCCAGGCGAATGATGGCAGACGATTATTGCATTGCTCAAACCTATATACAATTGTATGCAAAGTATCATGAACCGTTGATGATTGAAAAATTTAAACTACAGGCCGATTCTATCTGCTCTATGCCCCATACCGAATCTTTAGAGTGGAAGAACGATGTTCGTTTGAGGGAGTGGGCCTGGTGCGATGCATTGTTTATGGCACCGCCTGCATTGGCTTATTTAACTACAGTAACCAAAAACCCGAAATACCTGGATACTGCCTGTTCTTTATGGTGGAAAACAACAGATTATCTTTTTGATAAAGAGGAAGATTTATACTTCAGAGACAGCAAGTATTTTGATATGCGTGAAGCAAATGGCAAAAAGGTGTTTTGGTCTCGTGGGAATGGATGGGTGATGGCAGGGCTGGTACGCCTGCTGGAAGCAATGCCCCCTAAACATACACAAAGGGAAAAGTTTATAAGATTGTACAGAGAAATGGCAGAAAGAATTGCCGGGTTACAACATCAGGATGGTACCTGGCACAGTGCTTTATTAGATTCTGTAAGTTACCCGCTTAAAGAAACAAGTGGCACCGGTTTTTACTGTTATGCCCTTGCATGGGGCATTAATCATCATATAATACCTTATAAAAAATATGCTAAAGTGGTATGGAAAGCATGGGATGCATTAACAAATTGTGTGCACAGTAATGGTCAGTTGGGTTTTGTACAAAAAATAGGCGAGAAGCCCGGTGTTACAGATGATTCTAATACAGAAACATTTGGTGTAGGAGCATTCTTACTGGCAGGTTCGGAAATAATTACATTGAGTAGCCTTAAGCAATAA
PROTEIN sequence
Length: 370
MRKNTALLLIASVIFFGSVKAQYTYSANSVKQVMKKVADWQLNTWAEKGMKAAKWDWTNATAYAGFMAFDKIANDSTYCKAMYAIGEALQWNTGPRRMMADDYCIAQTYIQLYAKYHEPLMIEKFKLQADSICSMPHTESLEWKNDVRLREWAWCDALFMAPPALAYLTTVTKNPKYLDTACSLWWKTTDYLFDKEEDLYFRDSKYFDMREANGKKVFWSRGNGWVMAGLVRLLEAMPPKHTQREKFIRLYREMAERIAGLQHQDGTWHSALLDSVSYPLKETSGTGFYCYALAWGINHHIIPYKKYAKVVWKAWDALTNCVHSNGQLGFVQKIGEKPGVTDDSNTETFGVGAFLLAGSEIITLSSLKQ*