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SCN18_30_10_14_R4_B_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R4_B_scaffold_6_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(477..926)
DNA (450bp) protein (150aa)
heat-shock protein Hsp20 n=1 Tax=Microbacterium yannicii RepID=UPI0002EF8752
18 kDa antigen 2 {ECO:0000313|EMBL:CDK01616.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
molecular chaperone
SCN18_30_10_14_R4_B_scaffold_6_2
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1057..2661)
DNA (1605bp) protein (535aa)
Acyl-CoA synthetase n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NEW6_9MICC
Acyl-CoA synthetase {ECO:0000313|EMBL:EMR00350.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
o-succinylbenzoate--CoA ligase
SCN18_30_10_14_R4_B_scaffold_6_3
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2699..3151)
DNA (453bp) protein (151aa)
MaoC family dehydratase n=1 Tax=Microbacterium yannicii RepID=UPI000315E70C
acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:BAJ75092.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_30_10_14_R4_B_scaffold_6_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3183..4367)
DNA (1185bp) protein (395aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=12557086 bin=CNBR_ACIDO species=Microbacterium sp. 292MF genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:CDJ98963.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
acyl-CoA dehydrogenase domain-containing protein
SCN18_30_10_14_R4_B_scaffold_6_5
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(4369..5283)
DNA (915bp) protein (305aa)
amidohydrolase n=1 Tax=Microbacterium yannicii RepID=UPI0003153FB3
metal-dependent hydrolase of the TIM-barrel fold
Predicted metal-dependent hydrolase of the TIM-barrel fold {ECO:0000313|EMBL:BAJ75093.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_30_10_14_R4_B_scaffold_6_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(5286..6203)
DNA (918bp) protein (306aa)
Dehydrogenase with different specificities n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEK9_MICTS
dehydrogenase with different specificities
Dehydrogenase with different specificities {ECO:0000313|EMBL:BAJ75094.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_30_10_14_R4_B_scaffold_6_7
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6290..6748
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000344A07B
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ75095.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_30_10_14_R4_B_scaffold_6_8
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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comp(6771..8498)
DNA (1728bp) protein (576aa)
N-substituted formamide deformylase {ECO:0000313|EMBL:KJL31594.1}; EC=3.5.1.91 {ECO:0000313|EMBL:KJL31594.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
amidohydrolase n=1 Tax=Agromyces subbeticus RepID=UPI0003B4FCC6
metal-dependent glycoprotease
SCN18_30_10_14_R4_B_scaffold_6_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8495..9928)
DNA (1434bp) protein (478aa)
Putative amidase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HCY8_ACTM4
Amidase {ECO:0000313|EMBL:KHD76663.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative amidase
SCN18_30_10_14_R4_B_scaffold_6_10
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9925..11616)
DNA (1692bp) protein (564aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL32309.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL32309.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AC91
SCN18_30_10_14_R4_B_scaffold_6_11
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11613..12476)
DNA (864bp) protein (288aa)
ABC transporter permease n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003771F70
ABC transporter permease {ECO:0000313|EMBL:EYT56114.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
ABC transporter permease
SCN18_30_10_14_R4_B_scaffold_6_12
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12473..13432)
DNA (960bp) protein (320aa)
ABC transporter permease n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003660679
ABC transporter permease {ECO:0000313|EMBL:EYT56115.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
ABC transporter permease
SCN18_30_10_14_R4_B_scaffold_6_13
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(13470..15122)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036ACA65
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT56116.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
putative ABC transporter substrate-binding protein
SCN18_30_10_14_R4_B_scaffold_6_14
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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15248..15820
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035FBF44
Transcriptional regulator {ECO:0000313|EMBL:EYT56117.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_6_15
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15850..16320)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AC95
Uncharacterized protein {ECO:0000313|EMBL:EYT56118.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_6_16
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16317..17981)
DNA (1665bp) protein (555aa)
Cocaine esterase {ECO:0000313|EMBL:KJL26587.1}; EC=3.1.1.84 {ECO:0000313|EMBL:KJL26587.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative X-Pro dipeptidyl-peptidase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AC96
putative X-Pro dipeptidyl-peptidase
SCN18_30_10_14_R4_B_scaffold_6_17
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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18076..18696
DNA (621bp) protein (207aa)
putative TetR-family transcriptional regulator n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AC97
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL26593.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative TetR-family transcriptional regulator
SCN18_30_10_14_R4_B_scaffold_6_18
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18816..20039)
DNA (1224bp) protein (408aa)
Dyp-type peroxidase family n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7Y7_9MICO
Dyp-type peroxidase family {ECO:0000313|EMBL:EIC06960.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
iron-dependent peroxidase
SCN18_30_10_14_R4_B_scaffold_6_19
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(20039..20596)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7Y8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06961.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCN18_30_10_14_R4_B_scaffold_6_20
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20593..21204)
DNA (612bp) protein (204aa)
Copper resistance protein CopC n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7Y9_9MICO
Copper resistance protein CopC {ECO:0000313|EMBL:EIC06962.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Cu resistance protein CopC
SCN18_30_10_14_R4_B_scaffold_6_21
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(21280..22011)
DNA (732bp) protein (244aa)
Na+-driven multidrug efflux pump n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7Z0_9MICO
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:EIC06963.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Na+-driven multidrug efflux pump
SCN18_30_10_14_R4_B_scaffold_6_22
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(22035..22217)
DNA (183bp) protein (61aa)
Putative DNA recombinase n=1 Tax=Arthrobacter nicotinovorans RepID=Q8GAC0_ARTNI
Putative DNA recombinase {ECO:0000313|EMBL:CAD48011.1}; TaxID=29320 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nicotinovorans.;"
resolvase
SCN18_30_10_14_R4_B_scaffold_6_23
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(23053..23343)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4621E
signal transduction histidine kinase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCN18_30_10_14_R4_B_scaffold_6_24
unknown

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comp(23695..24312)
DNA (618bp) protein (206aa)

This feature has no annotations

SCN18_30_10_14_R4_B_scaffold_6_25
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24400..24516)
DNA (117bp) protein (39aa)
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGI8_MICTS
tRNA-dihydrouridine synthase
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:BAJ74071.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_30_10_14_R4_B_scaffold_6_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24737..24928)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL23490.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCN18_30_10_14_R4_B_scaffold_6_27
unknown

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comp(25037..25351)
DNA (315bp) protein (105aa)

This feature has no annotations

SCN18_30_10_14_R4_B_scaffold_6_trna_10
unknown

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comp(25997..26085)
DNA (89bp)
transferRNA Ser
SCN18_30_10_14_R4_B_scaffold_6_28
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26688..27449
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F4291
ECF RNA polymerase sigma factor SigW {ECO:0000313|EMBL:KJL30065.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
SCN18_30_10_14_R4_B_scaffold_6_29
unknown

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27439..27747
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 536 in total

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