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SCN18_26_2_15_R5_B_scaffold_1004

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1004_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..919
DNA (918bp) protein (306aa)
Glycosyl transferase group 1 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRN1_HYPDA
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_2
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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1269..2174
DNA (906bp) protein (302aa)
PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like n=1 Tax=Ovis aries RepID=UPI00029D4860
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_3
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2245..3618
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXV1_RHOCS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_4
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3618..4229
DNA (612bp) protein (204aa)
Polysaccharide biosynthesis n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT56_RHOCS
polysaccharide biosynthesis
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4368..6749
DNA (2382bp) protein (794aa)
Succinoglycan biosynthesis transport protein ExoP n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYH2_RHOCS
exoP; succinoglycan biosynthesis transport protein ExoP
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6778..8058)
DNA (1281bp) protein (427aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LR81_9PROT
UDP-glucose/GDP-mannose dehydrogenase family protein, putative Capsular polysaccharide biosynthesis protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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8221..9453
DNA (1233bp) protein (411aa)
monooxygenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000376D144
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:EHR06535.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
monooxygenase
SCN18_26_2_15_R5_B_scaffold_1004_8
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9604..10203
DNA (600bp) protein (200aa)
type 11 methyltransferase n=1 Tax=Pedobacter agri RepID=UPI00029B0050
Methyltransferase domain protein {ECO:0000313|EMBL:KHJ36987.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
type 11 methyltransferase
SCN18_26_2_15_R5_B_scaffold_1004_9
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10217..11146
DNA (930bp) protein (310aa)
Glycosyl transferase, family 2 n=1 Tax=Microcystis sp. T1-4 RepID=I4I8Z4_9CHRO
probable glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_26_2_15_R5_B_scaffold_1004_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11154..12425
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138Z4_RHOPS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1004_11
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(12430..13353)
DNA (924bp) protein (308aa)
Glycosyl transferase {ECO:0000313|EMBL:KEI68569.1}; EC=2.4.1.150 {ECO:0000313|EMBL:KEI68569.1};; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B31052
glycosyl transferase family 14
SCN18_26_2_15_R5_B_scaffold_1004_12
unknown

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comp(13532..13702)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 12 items

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