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SCN18_26_2_15_R5_B_scaffold_1110

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1110_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_1110_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(103..1338)
DNA (1236bp) protein (412aa)
Tiorf27 protein n=1 Tax=Rhizobium radiobacter RepID=Q9R6N2_RHIRD
MFS transporter {ECO:0000313|EMBL:KGE10430.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
major Facilitator Superfamily protein
SCN18_26_2_15_R5_B_scaffold_1110_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1367..1750)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP superfamily n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVW3_POLGS
endoribonuclease L-PSP superfamily
Endoribonuclease L-PSP superfamily {ECO:0000313|EMBL:ADZ69220.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_26_2_15_R5_B_scaffold_1110_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1809..3167
DNA (1359bp) protein (453aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZ41_9PROT
gid; glucose inhibited division protein Gid
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1110_5
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3309..3593
DNA (285bp) protein (95aa)
Acyl carrier protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRU2_RHOCS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1110_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3672..5021
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU97_VARPS
MATE efflux family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1110_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5153..5824)
DNA (672bp) protein (224aa)
O-methyltransferase, family 3 n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39B09_BURS3
O-methyltransferase
O-methyltransferase, family 3 {ECO:0000313|EMBL:ABB10352.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCN18_26_2_15_R5_B_scaffold_1110_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5901..6569
DNA (669bp) protein (223aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM36_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:ESX81196.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
TetR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_1110_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6595..7371
DNA (777bp) protein (259aa)
Precorrin-6A synthase, deacetylating n=1 Tax=Pseudomonas sp. GM21 RepID=J2NP19_9PSED
cobF; Precorrin-6A synthase (Deacetylating)
CobF protein {ECO:0000313|EMBL:AJE23766.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
SCN18_26_2_15_R5_B_scaffold_1110_10
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7378..8505)
DNA (1128bp) protein (376aa)
Formyl-coenzyme A transferase {ECO:0000313|EMBL:CEJ10549.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
L-carnitine dehydratase/bile acid-inducible protein F id=3964588 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_26_2_15_R5_B_scaffold_1110_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8505..9317)
DNA (813bp) protein (271aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Paracoccidioides brasiliensis (strain Pb18) RepID=C1GBN8_PARBD
Uncharacterized protein {ECO:0000313|EMBL:EEH48960.2}; TaxID=502780 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Paracoccidioides.;" source="Paracoccidioides brasiliensis (strain Pb18).;"
enoyl-CoA hydratase
SCN18_26_2_15_R5_B_scaffold_1110_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9429..10373)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QQ75_RALPI
HTH-type transcriptional regulator CysL {ECO:0000313|EMBL:CEJ10550.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_1110_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10469..11446
DNA (978bp) protein (326aa)
Putative exported protein n=3 Tax=Bordetella bronchiseptica RepID=K4QLS1_BORBO
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10548.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_1110_14
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11470..12420)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WY71_RHOS5
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EYU16672.1}; TaxID=1393736 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus luminescens BA1.;"
hypothetical protein
Displaying 14 items

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