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SCN18_26_2_15_R5_B_scaffold_2419

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_2419_1
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..219
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PJ56_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85455.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
transcriptional regulator, LysR family
SCN18_26_2_15_R5_B_scaffold_2419_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(226..1503)
DNA (1278bp) protein (426aa)
Peptidase family M28 n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XV25_9RHIZ
Peptidase family M28 {ECO:0000313|EMBL:EMS41478.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
peptidase M28
SCN18_26_2_15_R5_B_scaffold_2419_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1512..2390)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036CC4F7
Uncharacterized protein {ECO:0000313|EMBL:KHJ54140.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
LysR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_2419_4
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2507..3268
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y3M5_9RHIZ
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC36179.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter
SCN18_26_2_15_R5_B_scaffold_2419_5
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3296..4114
DNA (819bp) protein (273aa)
Bacterial extracellular solute-binding protein, family 3 n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YLZ3_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHJ54138.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain-containing protein
SCN18_26_2_15_R5_B_scaffold_2419_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4166..4831
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003633779
ABC transporter permease {ECO:0000313|EMBL:KHJ54137.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
SCN18_26_2_15_R5_B_scaffold_2419_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4831..6087
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000376EBA7
Vacuolar carboxypeptidase Cps1, putative {ECO:0000313|EMBL:EFE44731.1}; TaxID=663202 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.;" source="Trichophyton verrucosum (strain HKI 0517).;"
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
Displaying 7 items

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