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SCN18_26_2_15_R5_B_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_228_1
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..429
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003043C84
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_26_2_15_R5_B_scaffold_228_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(483..1157)
DNA (675bp) protein (225aa)
C-type lectin-like n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036D2344
C-type lectin-like domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCN18_26_2_15_R5_B_scaffold_228_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1306..2910
DNA (1605bp) protein (535aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_26_2_15_R5_B_scaffold_228_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2986..3702)
DNA (717bp) protein (239aa)
h16_A1245; ABC transporter ATPase (EC:3.6.3.22)
ABC-type transporter, ATPase component: HAAT family {ECO:0000313|EMBL:CAJ92385.1}; EC=3.6.3.22 {ECO:0000313|EMBL:CAJ92385.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
ABC-type transporter, ATPase component: HAAT family n=2 Tax=Burkholderiaceae RepID=Q0KC86_CUPNH
SCN18_26_2_15_R5_B_scaffold_228_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3706..4467)
DNA (762bp) protein (254aa)
ABC transporter ATPase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8K3_9BURK
ABC transporter ATPase {ECO:0000313|EMBL:EHP41045.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
branched-chain amino acid ABC transporter permease/ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_228_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4457..5410)
DNA (954bp) protein (318aa)
ABC transporter permease n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8K4_9BURK
ABC transporter permease {ECO:0000313|EMBL:EHP41046.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
branched-chain amino acid ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_228_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5416..6303)
DNA (888bp) protein (296aa)
Putative branched-chain amino acid transport system permease, membrane component n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2X5_CUPTR
branched-chain amino acid ABC transporter permease
Putative branched-chain amino acid transport system permease, membrane component {ECO:0000313|EMBL:CAQ68656.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
SCN18_26_2_15_R5_B_scaffold_228_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6314..7459)
DNA (1146bp) protein (382aa)
Putative branched amino acid transport system permease, periplasmic binding component n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2X4_CUPTR
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CEJ13497.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
branched amino acid transporter permease, periplasmic binding component
SCN18_26_2_15_R5_B_scaffold_228_9
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7507..8751)
DNA (1245bp) protein (415aa)
pigment protein n=1 Tax=Afipia birgiae RepID=UPI0002FA19A6
acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_228_10
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8898..9338
DNA (441bp) protein (147aa)
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1 n=1 Tax=Achromobacter piechaudii HLE RepID=J4J5X3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHK92926.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1
SCN18_26_2_15_R5_B_scaffold_228_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9342..10028)
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QEV2_9BRAD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGP10292.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
TetR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_228_12
unknown

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10176..10682
DNA (507bp) protein (169aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_228_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10684..11082
DNA (399bp) protein (133aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RWS1_MYCRN
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:CDO25534.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
lactoylglutathione lyase-like lyase
SCN18_26_2_15_R5_B_scaffold_228_14
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11079..12386)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003657E97
amidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_228_15
unknown

Not on your lists

12559..12921
DNA (363bp) protein (121aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_228_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13049..13936
DNA (888bp) protein (296aa)
Putative Zinc-dependent hydroxylase id=4255908 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas entomophila genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_228_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13948..14274
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0U6_9PROT
NIPSNAP family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_228_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14275..15252)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMF3_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_26_2_15_R5_B_scaffold_228_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15296..16267
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037CF2B4
MFS transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_228_20
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16373..17740
DNA (1368bp) protein (456aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERC5_BRASB
ABC transporter substrate-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABQ38719.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_26_2_15_R5_B_scaffold_228_21
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17778..18656
DNA (879bp) protein (293aa)
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKP4_9BRAD
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCE07032.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative ABC transporter permease protein
SCN18_26_2_15_R5_B_scaffold_228_22
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18653..19507
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030C6330
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCD95212.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_228_23
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19644..20861
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1H7_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EGP45845.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_228_24
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20848..23169
DNA (2322bp) protein (774aa)
hypothetical protein n=2 Tax=Herbaspirillum seropedicae RepID=UPI00035F3474
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK98387.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
SCN18_26_2_15_R5_B_scaffold_228_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23323..24723
DNA (1401bp) protein (467aa)
membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287A8B4
membrane bound O-acyl transferase MBOAT family protein
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:ABS66136.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_26_2_15_R5_B_scaffold_228_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24723..25844
DNA (1122bp) protein (374aa)
UPI0003A11A35 related cluster n=1 Tax=unknown RepID=UPI0003A11A35
Tax=BJP_IG2103_Dechloromonas_63_51
SCN18_26_2_15_R5_B_scaffold_228_27
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25861..27318
DNA (1458bp) protein (486aa)
MaoC domain protein dehydratase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M2R7_METRJ
dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AIQ89187.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCN18_26_2_15_R5_B_scaffold_228_28
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27382..27642
DNA (261bp) protein (87aa)
Acyl carrier protein n=4 Tax=Pseudomonas stutzeri RepID=A4VNH0_PSEU5
acyl carrier protein
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
SCN18_26_2_15_R5_B_scaffold_228_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27647..29539
DNA (1893bp) protein (631aa)
HAD-superfamily phosphatase subfamily IIIC n=1 Tax=mine drainage metagenome RepID=E6QIZ7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAM97945.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
HAD family phosphatase
SCN18_26_2_15_R5_B_scaffold_228_30
SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, Plasmid-like

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29788..30927
DNA (1140bp) protein (380aa)
Methyltransferase FkbM family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8N7_9BACT
FkbM family methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 60 in total

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