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SCN18_26_2_15_R5_B_scaffold_432

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_432_1
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
Hygromycin resistance protein n=1 Tax=Gibberella zeae RepID=Q20BM3_GIBZA
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AJD87519.1}; TaxID=300852 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579).;"
Hygromycin-B 4-O-kinase
SCN18_26_2_15_R5_B_scaffold_432_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(974..2317)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44889.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_26_2_15_R5_B_scaffold_432_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2314..2928)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000379D611
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44890.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_26_2_15_R5_B_scaffold_432_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2915..3487)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44891.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_26_2_15_R5_B_scaffold_432_5
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3484..4095)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037B6B91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44892.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_26_2_15_R5_B_scaffold_432_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4596..5195
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MDN2_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP25551.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_26_2_15_R5_B_scaffold_432_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5211..5693)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ69_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06507.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_432_8
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5742..6641)
DNA (900bp) protein (300aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C970
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:KFC70970.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transporter
SCN18_26_2_15_R5_B_scaffold_432_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6727..7215
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003624188
HTH-type transcriptional regulator MhqR {ECO:0000313|EMBL:CEJ12550.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_432_10
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..8011)
DNA (843bp) protein (281aa)
dienelactone hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030BB2C3
Dienelactone hydrolase {ECO:0000313|EMBL:KJC42360.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_432_11
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

8039..9010
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036FEA03
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CEJ11618.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AraC family transcription regulator
SCN18_26_2_15_R5_B_scaffold_432_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9021..9833)
DNA (813bp) protein (271aa)
UPI0003CE35D8 related cluster n=1 Tax=unknown RepID=UPI0003CE35D8
SAM-dependent methyltransferase PhcB {ECO:0000313|EMBL:ESY81171.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
type 11 methyltransferase
SCN18_26_2_15_R5_B_scaffold_432_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(9983..10807)
DNA (825bp) protein (275aa)
alpha/beta hydrolase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034738B0
Alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:ABD05918.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_26_2_15_R5_B_scaffold_432_14
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10896..11900
DNA (1005bp) protein (335aa)
glycerophosphoryl diester phosphodiesterase protein (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase protein {ECO:0000313|EMBL:AJC78429.1}; EC=3.1.4.46 {ECO:0000313|EMBL:AJC78429.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
Putative glycerophosphoryl diester phosphodiesterase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EI27_BRASB
SCN18_26_2_15_R5_B_scaffold_432_15
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..12384)
DNA (471bp) protein (157aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N9_9RHIZ
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EHK52416.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
activator of Hsp90 ATPase 1 family protein
SCN18_26_2_15_R5_B_scaffold_432_16
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12381..12734)
DNA (354bp) protein (118aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2H0G0_9CAUL
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EYF03813.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ArsR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_432_17
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12938..13900)
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=2 Tax=Dickeya dadantii (strain Ech703) RepID=C6C8B9_DICDC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS86085.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
SCN18_26_2_15_R5_B_scaffold_432_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14022..15005
DNA (984bp) protein (328aa)
Extra-cytoplasmic solute receptor family protein 179 n=1 Tax=uncultured bacterium RepID=K2DUN7_9BACT
Extra-cytoplasmic solute receptor family protein 179 {ECO:0000313|EMBL:EKD97483.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_432_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15093..15458
DNA (366bp) protein (122aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2HRB0_9CAUL
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:KFE60997.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ArsR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_432_20
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15433..15924
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AVU8_9CAUL
Putative glutathione S-transferase-related transmembrane protein {ECO:0000313|EMBL:KFE60996.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_432_21
unknown

Not on your lists

16004..16393
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_432_22
SCNPILOT_SOLID2_TRIM150_Phage_15, SCNPILOT_SOLID2_TRIM150_Phage_15, SCNPILOT_SOLID2_TRIM150_Phage_15, SCNPILOT_SOLID2_TRIM150_Phage_15, SCNPILOT_SOLID2_TRIM150_Phage_15, Phage

Not on your lists

16407..17180
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003641312
Heat shock protein-like protein {ECO:0000313|EMBL:KFC75611.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_432_23
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17191..17544
DNA (354bp) protein (118aa)
ArsC family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003488624
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62488.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_26_2_15_R5_B_scaffold_432_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17704..17922
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366A9CD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_432_25
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17956..18195)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1R8_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_432_26
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18457..19104
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RPR4_RHORT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_432_27
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19109..20446
DNA (1338bp) protein (446aa)
Putative pyrrolo-quinoline quinone n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLC6_9PROT
Conserved protein of unknown function. Similar to WD40-like repeat [amb1343] from Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_432_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20433..21866
DNA (1434bp) protein (478aa)
GTPase Der n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5R0_9PROT
engA; GTP-binding protein EngA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_432_29
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21863..22621)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYV4_PARL1
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCN18_26_2_15_R5_B_scaffold_432_30
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22632..24131)
DNA (1500bp) protein (500aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SC57_PHAFV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 39 in total

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