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SCN18_26_2_15_R5_B_scaffold_706

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_706_1
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1430
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C3P6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD75683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_26_2_15_R5_B_scaffold_706_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1473..2180)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037748C7
ampD; N-acetylmuramoyl-L-alanine amidase (family 2) with peptidoglycan binding domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_706_3
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2211..2912)
DNA (702bp) protein (234aa)
DnaJ-like protein DjlA n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNG1_9PROT
heat shock protein DnaJ domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_706_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3652)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Agrobacterium RepID=Q7D0R0_AGRT5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_706_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3959..6163
DNA (2205bp) protein (735aa)
UvrABC system protein B n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVG9_PARL1
excinuclease ABC subunit B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_706_6
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6222..7379)
DNA (1158bp) protein (386aa)
Transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G2N7_9BURK
Putative Regulatory protein LuxR {ECO:0000313|EMBL:CDX12042.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator, LuxR family protein
SCN18_26_2_15_R5_B_scaffold_706_7
unknown

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7631..7978
DNA (348bp) protein (116aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_706_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8222..9697)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D4K5_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY54584.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_706_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9895..10557
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EFBA0
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50336.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
LuxR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_706_10
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(10597..11190)
DNA (594bp) protein (198aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Ralstonia pickettii OR214 RepID=R0E358_RALPI
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETR78732.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LuxR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_706_11
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11187..12248)
DNA (1062bp) protein (354aa)
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Ralstonia pickettii RepID=B2UKG4_RALPJ
Signal transduction histidine kinase {ECO:0000313|EMBL:GAN50976.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
integral membrane sensor signal transduction histidine kinase
SCN18_26_2_15_R5_B_scaffold_706_12
unknown

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12515..12709
DNA (195bp) protein (65aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_706_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12809..13228
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VGX4_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU45371.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_26_2_15_R5_B_scaffold_706_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13442..16420)
DNA (2979bp) protein (993aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_26_2_15_R5_B_scaffold_706_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16579..17415
DNA (837bp) protein (279aa)
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MS6_RHOP5
dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_706_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17466..18998)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D319_BRAJP
pyridine nucleotide-disulfide oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:BAL12030.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_26_2_15_R5_B_scaffold_706_17
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..20081
DNA (870bp) protein (290aa)
Major facilitator transporter n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSZ3_PUSST
major facilitator transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 17 items

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