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SCN18_26_2_15_R5_B_scaffold_739

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_739_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..798
DNA (798bp) protein (266aa)
Putative racemase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0F2_9PROT
Putative racemase {ECO:0000313|EMBL:EDP62208.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
coA-transferase III family protein
SCN18_26_2_15_R5_B_scaffold_739_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1088..2173)
DNA (1086bp) protein (362aa)
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW09_9PROT
ABC transporter ATPase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_739_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2217..2696)
DNA (480bp) protein (160aa)
Putative acetyltransferase protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0F6_9PROT
acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_739_4
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2743..3891
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360F038
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EKE77379.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Iron-containing alcohol dehydrogenase
SCN18_26_2_15_R5_B_scaffold_739_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4026..4802
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D2D00D
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC47228.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
dehydrogenase-like protein
SCN18_26_2_15_R5_B_scaffold_739_6
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5112..5876
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A702_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CPR21939.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_739_7
unknown

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5926..6213
DNA (288bp) protein (96aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_739_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6329..7876
DNA (1548bp) protein (516aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036739F1
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC60877.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative extracellular solute-binding protein
SCN18_26_2_15_R5_B_scaffold_739_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7916..8869
DNA (954bp) protein (318aa)
peptide ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F508CE
Peptide/nickel transport system permease {ECO:0000313|EMBL:ERF80648.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative didpeptide ABC transporter permease protein
SCN18_26_2_15_R5_B_scaffold_739_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8850..9719
DNA (870bp) protein (290aa)
Glutathione transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE34_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46256.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_739_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9716..10711
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEA28989.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEA28989.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L716_PSEUX
oligopeptide/dipeptide ABC transporter ATPase
SCN18_26_2_15_R5_B_scaffold_739_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10708..11667
DNA (960bp) protein (320aa)
Putative peptide ABC transport protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCC2_9BRAD
putative peptide ABC transport protein
Putative peptide ABC transport protein {ECO:0000313|EMBL:BAL78409.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_26_2_15_R5_B_scaffold_739_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11670..12407)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYR7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35482.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_739_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12404..12973)
DNA (570bp) protein (190aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1Z6_9BRAD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS35481.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
sigma-70 region 2
SCN18_26_2_15_R5_B_scaffold_739_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13228..14004
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CI1_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE38208.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_26_2_15_R5_B_scaffold_739_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..14627)
DNA (366bp) protein (122aa)
Addiction module antidote protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2B0_9RHOB
Addiction module antidote protein {ECO:0000313|EMBL:EEW24781.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_739_17
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14654..14944)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXW4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54440.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_739_trna_1
unknown

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comp(15155..15228)
DNA (74bp)
transferRNA Pro
SCN18_26_2_15_R5_B_scaffold_739_18
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15344..16168
DNA (825bp) protein (275aa)
aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T924_CAUSK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_739_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16193..17089)
DNA (897bp) protein (299aa)
Transcription regulator protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIL5_9BRAD
DNA-binding transcriptional activator GcvA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
SCN18_26_2_15_R5_B_scaffold_739_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17198..18952
DNA (1755bp) protein (585aa)
isovaleryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360D349
acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_739_21
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18982..19275
DNA (294bp) protein (98aa)
Extra-cytoplasmic solute receptor n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GSG0_CUPNN
LysR family transcriptional regulator
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:AEI81018.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Displaying 22 items

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