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SCN18_26_2_15_R5_B_scaffold_780

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_780_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..993)
DNA (993bp) protein (331aa)
Amino acid ABC transporter, substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALT4_AZOBR
aapJ; amino acid ABC transporter, substrate-binding component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1135..2556)
DNA (1422bp) protein (474aa)
peptidase M24 n=1 Tax=Rhizobium loti RepID=UPI00036D7EF6
peptidase, M23/M37 family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_3
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2934..3812
DNA (879bp) protein (293aa)
Pirin-like protein id=3022940 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Putative BCR, YhhW family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_4
unknown

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comp(3849..4190)
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_780_5
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4522..5190
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003133FEF
TetR family transcriptional regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
SCN18_26_2_15_R5_B_scaffold_780_6
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5183..6046
DNA (864bp) protein (288aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EQM34894.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EQM34894.1};; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030297FA
SCN18_26_2_15_R5_B_scaffold_780_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6177..7667
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376589A
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACS22455.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_26_2_15_R5_B_scaffold_780_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7714..9249)
DNA (1536bp) protein (512aa)
MlrC family protein 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRP4_9PROT
MlrC family protein 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9261..10199)
DNA (939bp) protein (313aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EKE72934.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EKE72934.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
D-cysteine desulfhydrase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR53_9PROT
D-cysteine desulfhydrase
SCN18_26_2_15_R5_B_scaffold_780_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10279..10791)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BC8CB
Carboxylesterase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11153..11725)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DG51_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..12429)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12441..13388)
DNA (948bp) protein (316aa)
Dehydrogenase with different specificities id=4492358 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_14
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13385..14422)
DNA (1038bp) protein (346aa)
Oxidoreductase FAD-binding subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU0_TISMK
ndoR; oxidoreductase FAD-binding subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_15
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14480..15010
DNA (531bp) protein (177aa)
Bacterial regulatory protein, MarR n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0I4_AROAE
marR; transcriptional regulator MarR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_16
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15021..16301
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUM0_PARL1
major facilitator superfamily transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_17
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16298..16798
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7U3_9GAMM
thioesterase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16795..17676)
DNA (882bp) protein (294aa)
Putative xylanase/chitin deacetylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CX38_9BRAD
polysaccharide deacetylase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_780_19
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17669..18139)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8F7_9BRAD
Asp/Glu/hydantoin racemase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 19 items

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