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SCN18_26_2_15_R5_B_scaffold_810

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_810_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_810_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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189..1088
DNA (900bp) protein (300aa)
Polysaccharide deacetylase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDP65343.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase family protein
SCN18_26_2_15_R5_B_scaffold_810_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1090..2025
DNA (936bp) protein (312aa)
Chitooligosaccharide deacetylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF5_9PROT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_810_4
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2078..3310
DNA (1233bp) protein (411aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EPV9_9BURK
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_26_2_15_R5_B_scaffold_810_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3341..4213
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XBR5_9BURK
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_26_2_15_R5_B_scaffold_810_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4210..5223
DNA (1014bp) protein (338aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5
amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_26_2_15_R5_B_scaffold_810_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5381..6256)
DNA (876bp) protein (292aa)
glutathione S-transferase n=1 Tax=Rhizobium leguminosarum RepID=UPI000373451F
Glutathione S-transferase {ECO:0000313|EMBL:EJC63455.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
putative glutathione S-transferase YghU
SCN18_26_2_15_R5_B_scaffold_810_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6378..7106
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5H8_9BRAD
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_26_2_15_R5_B_scaffold_810_9
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7099..7800
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F0T5_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK68115.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
ABC transporter-like protein
SCN18_26_2_15_R5_B_scaffold_810_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7946..8869
DNA (924bp) protein (308aa)
SCN18_26_2_15_R5_B_scaffold_810_11
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8936..9769
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035CF289
Transcription regulator protein {ECO:0000313|EMBL:ENN86377.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_810_12
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(9782..10777)
DNA (996bp) protein (332aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
putative oligopeptide ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_810_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(10758..11750)
DNA (993bp) protein (331aa)
ABC transporter ATPase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7D1_9BURK
Oligopeptide transport system permease protein OppB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_810_14
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11756..13471)
DNA (1716bp) protein (572aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EE52_9BURK
dppA; peptide ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_810_15
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13501..14394)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LEI7_RALME
dppC; binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_810_16
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14391..15344)
DNA (954bp) protein (318aa)
Peptide ABC transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GJE9_9BURK
Peptide ABC transporter {ECO:0000313|EMBL:ESH88310.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
dppB3; ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_810_17
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15329..16804)
DNA (1476bp) protein (492aa)
Amidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ87_9BURK
putative amidase
Tax=GWA2_Rokubacteria_73_35_curated
SCN18_26_2_15_R5_B_scaffold_810_18
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16820..17215)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036CDCA6
Nuclear transport factor {ECO:0000313|EMBL:EKF03199.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_810_19
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17306..17470)
DNA (165bp) protein (55aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE65
Membrane protein {ECO:0000313|EMBL:KJS43893.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
Displaying 19 items

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