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SCN18_26_2_15_R5_B_scaffold_970

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_970_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..641)
DNA (639bp) protein (213aa)
Predicted hydrolase or acyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUF8_9PROT
hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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700..1836
DNA (1137bp) protein (379aa)
Glycosyl transferase, group 1 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUF9_9PROT
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2027..3970
DNA (1944bp) protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Threonine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4Y6_9PROT
thrS; threonyl-tRNA synthetase
SCN18_26_2_15_R5_B_scaffold_970_4
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4144..4578
DNA (435bp) protein (145aa)
Translation initiation factor IF-3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=IF3_PARL1
translation initiation factor IF-3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_5
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4678..5685)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKH1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46351.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
LacI family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_970_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5792..6661
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH91_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83090.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
phytanoyl-CoA dioxygenase family protein
SCN18_26_2_15_R5_B_scaffold_970_7
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6705..8045
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HF54_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46353.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
MFS transporter, metabolite:H+ symporter (MHS) family protein
SCN18_26_2_15_R5_B_scaffold_970_8
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8088..8915
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FB3BC4
Uncharacterized protein {ECO:0000313|EMBL:ERF83092.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
xylose isomerase-like protein
SCN18_26_2_15_R5_B_scaffold_970_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9238..9996)
DNA (759bp) protein (253aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000382B872
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_10
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10146..10349
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Aureimonas ureilytica RepID=UPI00037984AE
LSU ribosomal protein L35p
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_11
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

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10356..10712
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF56_AZOBR
rplT; 50S ribosomal subunit protein L20
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_970_12
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10814..11914
DNA (1101bp) protein (367aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2KL20_9PROT
SCN18_26_2_15_R5_B_scaffold_970_13
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..14073
DNA (2163bp) protein (721aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4Z4_9PROT
Displaying 13 items

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