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SCN18_26_2_15_R5_B_scaffold_973

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_973_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..155)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DE3EDB
transglycosylase-associated protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(187..1008)
DNA (822bp) protein (274aa)
exodeoxyribonuclease III family protein (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R186_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_3
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1074..2033
DNA (960bp) protein (320aa)
Putative neutral zinc metallopeptidase n=1 Tax=Azoarcus sp. KH32C RepID=H0PVN1_9RHOO
putative neutral zinc metallopeptidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2406..3107)
DNA (702bp) protein (234aa)
Putative fumarylpyruvate hydrolase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z255_AZOL4
putative fumarylpyruvate hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_5
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3149..3853)
DNA (705bp) protein (235aa)
GntR family transcriptional regulator n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JCA7_9BURK
Predicted regulator PutR for proline utilization, GntR family {ECO:0000313|EMBL:CEL16090.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
GntR family transcriptional regulator
SCN18_26_2_15_R5_B_scaffold_973_6
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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3939..4328
DNA (390bp) protein (130aa)
Glyoxylase I family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M119_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX09332.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_973_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4357..5349
DNA (993bp) protein (331aa)
Oligopeptide transport ATP-binding protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTB3_SYNAS
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM43716.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
peptide ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_973_8
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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5339..6358
DNA (1020bp) protein (340aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GVG5_STRC2
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDY50311.1}; Putative peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFG09480.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
peptide ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_973_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6395..8017
DNA (1623bp) protein (541aa)
Extracellular solute-binding protein family 5 n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEK3_RHOPX
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADU44035.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_26_2_15_R5_B_scaffold_973_10
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8024..8989
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=4 Tax=Delftia RepID=A9BXM2_DELAS
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCN18_26_2_15_R5_B_scaffold_973_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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9047..9853
DNA (807bp) protein (269aa)
Dipeptide ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEM0_AZOL4
dppC3; Dipeptide ABC transporter, permease component
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCN18_26_2_15_R5_B_scaffold_973_12
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9960..10571
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6Q1_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_13
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10572..11681)
DNA (1110bp) protein (370aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVK1_RHOCS
hrcA; heat-inducible transcription repressor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_14
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11788..12507
DNA (720bp) protein (240aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUC5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_15
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12507..13121
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CY95_9RHOB
deoxyribonucleotide triphosphate pyrophosphatase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_973_16
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13193..14047
DNA (855bp) protein (285aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B45797
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 16 items

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