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SCN18_25_1_16_R2_B_scaffold_3292

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_3292_1
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..417
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003629D10
major intrinsic protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCN18_25_1_16_R2_B_scaffold_3292_2
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(390..1145)
DNA (756bp) protein (252aa)
GntR family transcriptional regulator n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI0003760CD7
HTH-type transcriptional repressor YvoA {ECO:0000313|EMBL:KJF18363.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
GntR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_3292_3
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1149..1637)
DNA (489bp) protein (163aa)
Membrane protein containing DUF1634 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C1W4_9ZZZZ
Membrane protein containing DUF1634 {ECO:0000313|EMBL:EQD60085.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_3292_4
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1634..2473)
DNA (840bp) protein (280aa)
Permease (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZVE7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJF18365.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
permease
SCN18_25_1_16_R2_B_scaffold_3292_5
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2544..3506)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9T4T0_COREQ
Uncharacterized protein {ECO:0000313|EMBL:KGN40646.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_3292_6
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3608..4486)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00035CC4E8
Uncharacterized protein {ECO:0000313|EMBL:KHJ73347.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_3292_7
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4568..4801
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7LC00_NOCAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR11153.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCN18_25_1_16_R2_B_scaffold_3292_8
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4888..5304)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
Ribonuclease VapC n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XCL4_9MICO
nucleic acid-binding protein, contains PIN domain
SCN18_25_1_16_R2_B_scaffold_3292_9
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5301..5537)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VK05_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB96558.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein
Displaying 9 items

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