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SCN18_25_1_16_R2_B_scaffold_29399_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2..151

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362D83A similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 46.0
  • Bit_score: 69
  • Evalue 6.40e-10
RNA polymerase sigma factor {ECO:0000313|EMBL:KJL24589.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 49.0
  • Bit_score: 74
  • Evalue 3.60e-11
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 47.0
  • Bit_score: 64
  • Evalue 5.80e-09

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 150
CAGCTCGAGGCGGCGATCCGGTCGGTCCACTGCGACCGGGCCCGGACCGGCGTGCGCGACCGCGACGCGCTGGTCGACCTCTACCGCGGGCTGGTCGCGATCGCCCCCACCGCGGGCGCGCTGGCGGCCCTGGCCACCCTGGGAGGCTAG
PROTEIN sequence
Length: 50
QLEAAIRSVHCDRARTGVRDRDALVDLYRGLVAIAPTAGALAALATLGG*