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SCN18_25_1_16_R2_B_scaffold_29399_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 274..1014

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362D83A similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 247.0
  • Bit_score: 368
  • Evalue 3.40e-99
RNA polymerase sigma factor {ECO:0000313|EMBL:KJL35178.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 250.0
  • Bit_score: 343
  • Evalue 1.60e-91
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 255.0
  • Bit_score: 286
  • Evalue 6.20e-75

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCCGAGACCTCTCTGCCGCCCGACGACATCCTGCTGGCCCACTTCATCGTCTCCGACGACCTCTGGGTGGCCCTCGAGGAGCCGGAGCCCGACGCCATCCCCGACCGCCCCCTGGAGCTGCTCTTCGCGTGCGCCCACCCGGCGATCGAGCCCGCGGCGCGCACGCCGCTCATGCTGCAGGTGGTGCTCGGCTTCGACGCCGCGCGCATCGCCCGGGCGTTCGCGGTGGAGCCGGCGGCGATGGCGCAGCGCCTGGTGCGGGCCAAGCGCCGGATCCGGGACGCCGGCATCCCGTTCCGGGTGCCGACGCGGGCCGACATGCCGTCCCGGCTGCCCGCCGTGCTCGAGGCGGTCTACGGCGCCTACGCCATCGACTGGCTGGACCAGCACGACCGGATCCGCGACTCGGTCGCCGACGAGGCGCGGTGGCTCGCCGTGCTCACCGCGAGCCTGCTGGGCACCGAGCCCGAGGCGTGGGGCCTGGCTGCGCTGCTGACGTTCGCCCAGTCACGCGCCCCGGCCCGCACCGGCGACCCGTGGCCCGGGCTCGACGAGCAGGACACCGGGCTGTGGGACCGGGCGCTCATCGCCGAGGGAGAGGCGCTGCTGCGGCGGGCCCACGCCCTGGGGGCGCCGCTCGGTAGGTTCCAGCTCGAGGCGGCGATCCAGTCGGTCCACTGCGACCGGGCCCGGACCGGCGTGCTCGACCGCGACGCGCTGGTCGACCTCTACCGCGGG
PROTEIN sequence
Length: 247
MAETSLPPDDILLAHFIVSDDLWVALEEPEPDAIPDRPLELLFACAHPAIEPAARTPLMLQVVLGFDAARIARAFAVEPAAMAQRLVRAKRRIRDAGIPFRVPTRADMPSRLPAVLEAVYGAYAIDWLDQHDRIRDSVADEARWLAVLTASLLGTEPEAWGLAALLTFAQSRAPARTGDPWPGLDEQDTGLWDRALIAEGEALLRRAHALGAPLGRFQLEAAIQSVHCDRARTGVLDRDALVDLYRG