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SCN18_25_1_16_R2_B_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_50_1
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..693
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0C1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47909.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_25_1_16_R2_B_scaffold_50_2
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

824..2125
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRM8_9BRAD
Sorbosone dehydrogenase {ECO:0000313|EMBL:KJC58015.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2112..2816)
DNA (705bp) protein (235aa)
Polyphosphate glucokinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK2_NITHX
polyphosphate glucokinase
Polyphosphate glucokinase {ECO:0000313|EMBL:ABE62895.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_4
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3051..3266
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003152280
Uncharacterized protein {ECO:0000313|EMBL:EKS38666.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3301..3891)
DNA (591bp) protein (197aa)
NADPH-dependent FMN reductase n=1 Tax=Afipia birgiae RepID=UPI0002DF424F
Uncharacterized protein {ECO:0000313|EMBL:EKS40247.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
NADPH-dependent FMN reductase (fragment)
SCN18_25_1_16_R2_B_scaffold_50_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4017..4892
DNA (876bp) protein (292aa)
Glutathione S-transferase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135T6_RHOPS
putative glutathione S-transferase YghU
Glutathione S-transferase-like {ECO:0000313|EMBL:ABE40153.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R2_B_scaffold_50_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4899..5204)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V642_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08214.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_8
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5373..6227)
DNA (855bp) protein (285aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D54075
Uncharacterized protein {ECO:0000313|EMBL:EKS38667.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCN18_25_1_16_R2_B_scaffold_50_9
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..6626)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLR6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:ETR75196.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
lipoprotein
SCN18_25_1_16_R2_B_scaffold_50_10
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6773..6922)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Bradyrhizobium RepID=I2Q9R5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG56521.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7033..7266
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCL9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR77175.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7314..8018)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003633897
PiT family inorganic phosphate transporter {ECO:0000313|EMBL:ERF81499.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8282..8962
DNA (681bp) protein (227aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK0_NITHX
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE62897.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9153..9683
DNA (531bp) protein (177aa)
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064166};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ9_NITHX
SCN18_25_1_16_R2_B_scaffold_50_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9680..10024)
DNA (345bp) protein (115aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GVD1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46066.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_16
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10179..10844
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62899.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10996..11295
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62900.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11355..11918)
DNA (564bp) protein (188aa)
acetyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003473D0A
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU43987.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCN18_25_1_16_R2_B_scaffold_50_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12079..12477)
DNA (399bp) protein (133aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GVD6_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45980.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_20
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..13340
DNA (804bp) protein (268aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369EAB6
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ42731.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
substrate-binding protein
SCN18_25_1_16_R2_B_scaffold_50_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13337..14617)
DNA (1281bp) protein (427aa)
acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX49_RHOP2
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ABD07211.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_25_1_16_R2_B_scaffold_50_22
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14755..14907
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VJG6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN06182.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCN18_25_1_16_R2_B_scaffold_50_23
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14933..15172
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62901.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_24
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15193..16023)
DNA (831bp) protein (277aa)
short-chain dehydrogenase/reductase (SDR) (EC:1.1.1.-)
Putative short-chain dehydrogenase/reductase (SDR) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LDG6_RALME
Short-chain dehydrogenase {ECO:0000313|EMBL:ETR76094.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_25_1_16_R2_B_scaffold_50_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16206..16367)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9T7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG56543.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_26
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17015
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030CC686
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_50_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17125..17679)
DNA (555bp) protein (185aa)
CreA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ5_NITHX
CreA
CreA {ECO:0000313|EMBL:ABE62902.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_50_28
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17927..19543
DNA (1617bp) protein (539aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N9_RHOPB
hypothetical protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD87897.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R2_B_scaffold_50_29
unknown

Not on your lists

comp(19540..19782)
DNA (243bp) protein (81aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_50_30
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20037..20975
DNA (939bp) protein (313aa)
Polysaccharide deacetylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLJ3_NITHX
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE62904.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 1-30 of 236 in total

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