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SCN18_25_1_16_R2_B_scaffold_116

Search features with annotation key words

Displaying items 61-90 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_116_60
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(69794..70768)
DNA (975bp) protein (325aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N478_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKF19038.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter, permease protein
SCN18_25_1_16_R2_B_scaffold_116_61
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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71186..72139
DNA (954bp) protein (318aa)
polysaccharide deacetylase family protein (EC:3.-.-.-)
Polysaccharide deacetylase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX07091.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCN18_25_1_16_R2_B_scaffold_116_62
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72309..72809
DNA (501bp) protein (167aa)
MarR family transcriptional regulator n=1 Tax=Xanthomonas axonopodis RepID=UPI00036735C8
MarR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R2_B_scaffold_116_63
unknown

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72961..73818
DNA (858bp) protein (286aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_116_64
unknown

Not on your lists

73828..74064
DNA (237bp) protein (79aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_116_65
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(74103..75413)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036A2693
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:EID80516.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
Rieske (2Fe-2S) domain-containing protein
SCN18_25_1_16_R2_B_scaffold_116_66
unknown

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comp(75530..75667)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_25_1_16_R2_B_scaffold_116_67
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(76389..77924)
DNA (1536bp) protein (512aa)
Putative dipeptide ABC transporter (Substrate-binding protein) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJG0_9BRAD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC38026.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
peptide ABC transporter substrate-binding protein
SCN18_25_1_16_R2_B_scaffold_116_68
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78034..79155)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETX00528.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_69
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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79863..80861
DNA (999bp) protein (333aa)
UDP-glucose-4-epimerase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YDA7_9BRAD
UDP-glucose-4-epimerase {ECO:0000313|EMBL:EHR01293.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
exoB; UDP-glucose 4'-epimerase
SCN18_25_1_16_R2_B_scaffold_116_70
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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81118..83184
DNA (2067bp) protein (689aa)
KUP system potassium uptake protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HE36_9BRAD
KUP system potassium uptake protein {ECO:0000313|EMBL:ERF82711.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
lipopolysaccharide biosynthesis
SCN18_25_1_16_R2_B_scaffold_116_71
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(83268..84482)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG8_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43326.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_72
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84497..85696)
DNA (1200bp) protein (400aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R7C4_9THEO
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43612.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCN18_25_1_16_R2_B_scaffold_116_73
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85693..87000)
DNA (1308bp) protein (436aa)
Polysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UG58_METS4
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43325.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
polysaccharide biosynthesis protein
SCN18_25_1_16_R2_B_scaffold_116_74
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(87037..88209)
DNA (1173bp) protein (391aa)
Putative glycosyltransferase CpsG n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13NU3_BURXL
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43324.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glycosyl transferases group 1 family protein
SCN18_25_1_16_R2_B_scaffold_116_75
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(88344..89654)
DNA (1311bp) protein (437aa)
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43323.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Putative uncharacterized protein id=4141092 bin=GWC2_Bacteroidetes_40_22 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_76
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89892..90728
DNA (837bp) protein (279aa)
Glycosyl transferase, family 2 n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I907_BACTU
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EEM93317.1}; TaxID=527019 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis IBL 200.;"
carbon starvation protein A
SCN18_25_1_16_R2_B_scaffold_116_77
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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90725..92116
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJV7_BEII9
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43322.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_78
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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92303..93937
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PM55_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39463.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_79
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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93953..95050
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG7_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49556.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_trna_4
unknown

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comp(95139..95211)
DNA (73bp)
transferRNA Pseudo
SCN18_25_1_16_R2_B_scaffold_116_80
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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95288..95458
DNA (171bp) protein (57aa)
Resolvase domain n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z8S7_METPB
resolvase
Resolvase domain {ECO:0000313|EMBL:ACB83229.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCN18_25_1_16_R2_B_scaffold_116_trna_3
unknown

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comp(95361..95434)
DNA (74bp)
transferRNA Arg
SCN18_25_1_16_R2_B_scaffold_116_81
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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95688..96095
DNA (408bp) protein (136aa)
Bll0845 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89W49_BRADU
biphenyl-2,3-diol 1,2-dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:KGJ65284.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCN18_25_1_16_R2_B_scaffold_116_82
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96106..96786)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003652526
Methyltransferase type 12 {ECO:0000313|EMBL:KFC73787.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type 12 methyltransferase
SCN18_25_1_16_R2_B_scaffold_116_83
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(96783..98072)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036693FD
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase {ECO:0000313|EMBL:KFC73788.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_84
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98160..99752
DNA (1593bp) protein (531aa)
crotonobetaine/carnitine-CoA ligase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035E3DB1
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50352.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative crotonobetaine/carnitine-CoA ligase
SCN18_25_1_16_R2_B_scaffold_116_85
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99769..100863)
DNA (1095bp) protein (365aa)
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGE6_NITHX
response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABE64701.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_116_86
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101097..101999
DNA (903bp) protein (301aa)
Epoxide hydrolase {ECO:0000313|EMBL:ETY83948.2}; EC=3.3.2.9 {ECO:0000313|EMBL:ETY83948.2};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Burkholderia sp. BT03 RepID=J3C2C6_9BURK
alpha/beta hydrolase fold protein
SCN18_25_1_16_R2_B_scaffold_116_87
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102076..104370)
DNA (2295bp) protein (765aa)
aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030B19A3
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJC61709.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
aldehyde dehydrogenase
Displaying items 61-90 of 225 in total

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