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SCN18_25_1_16_R2_B_scaffold_116

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Displaying items 211-225 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_116_207
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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238630..240498
DNA (1869bp) protein (623aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R2_B_scaffold_116_208
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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240656..241300
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2S8_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05232.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_25_1_16_R2_B_scaffold_116_209
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(241703..243091)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Brevibacillus laterosporus RepID=UPI000378BC4B
DGQHR domain protein {ECO:0000313|EMBL:KGC09058.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
DNA-sulfur modification-associated family protein
SCN18_25_1_16_R2_B_scaffold_116_210
SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33, Plasmid-like

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comp(243285..244037)
DNA (753bp) protein (251aa)
Resolvase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7W1_9BRAD
Resolvase domain protein {ECO:0000313|EMBL:EFI51321.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
resolvase-like
SCN18_25_1_16_R2_B_scaffold_116_211
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(244743..246671)
DNA (1929bp) protein (643aa)
Integrase family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZXP7_RHILW
Integrase family protein
Integrase family protein {ECO:0000313|EMBL:AIQ88702.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
SCN18_25_1_16_R2_B_scaffold_116_trna_2
unknown

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comp(246756..246839)
DNA (84bp)
transferRNA Leu
SCN18_25_1_16_R2_B_scaffold_116_212
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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246991..247959
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSI5_9BRAD
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EAQ37017.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
NAD-dependent epimerase/dehydratase
SCN18_25_1_16_R2_B_scaffold_116_213
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(247961..248902)
DNA (942bp) protein (314aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Undecaprenyl-diphosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=UPPP_NITHX
SCN18_25_1_16_R2_B_scaffold_116_214
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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249070..249762
DNA (693bp) protein (231aa)
Glutathione S-transferase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13ES8_RHOPS
glutathione S-transferase-like protein
Glutathione S-transferase-like {ECO:0000313|EMBL:ABE37411.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_25_1_16_R2_B_scaffold_116_215
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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249887..251065
DNA (1179bp) protein (393aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
4Fe-4S ferredoxin n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BA046
iron-sulfur cluster binding protein
SCN18_25_1_16_R2_B_scaffold_116_216
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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251228..252034
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000381A91B
Uncharacterized protein {ECO:0000313|EMBL:EJZ35850.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_116_217
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(252191..252661)
DNA (471bp) protein (157aa)
Lactoylglutathione lyase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKX4_9BRAD
Lactoylglutathione lyase {ECO:0000313|EMBL:ERF84485.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
polyketide cyclase
SCN18_25_1_16_R2_B_scaffold_116_218
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252807..253583)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS18_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60979.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_116_219
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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253734..254342
DNA (609bp) protein (203aa)
Translation initiation factor IF-3 n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RYG1_9BRAD
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_25_1_16_R2_B_scaffold_116_220
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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254710..254910
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL35_NITHX
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 211-225 of 225 in total

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