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SCN18_13_7_16_R5_B_scaffold_1097

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_1097_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..233)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HA10_SHIFL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCN18_13_7_16_R5_B_scaffold_1097_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(312..1610)
DNA (1299bp) protein (433aa)
L-rhamnose catabolism isomerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSV9_RHITR
rhaI; L-rhamnose catabolism isomerase
L-rhamnose catabolism isomerase {ECO:0000313|EMBL:AGB74383.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCN18_13_7_16_R5_B_scaffold_1097_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1614..3728)
DNA (2115bp) protein (705aa)
yuxG; oxidoreductase YuxG (EC:1.-.-.-)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031878F3
Short chain dehydrogenase {ECO:0000313|EMBL:EKM98562.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCN18_13_7_16_R5_B_scaffold_1097_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3870..4742
DNA (873bp) protein (291aa)
Transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YI41_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EKM98561.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ulaR; DeoR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_1097_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4731..6095)
DNA (1365bp) protein (455aa)
carbohydrate kinase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B336C8
Carbohydrate kinase {ECO:0000313|EMBL:KKB12180.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
sugar kinase
SCN18_13_7_16_R5_B_scaffold_1097_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6422..7474)
DNA (1053bp) protein (351aa)
opine dehydrogenase (EC:1.5.1.28)
Opine dehydrogenase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WI24_VEREI
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KFC69317.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_13_7_16_R5_B_scaffold_1097_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7485..8606)
DNA (1122bp) protein (374aa)
Opine oxidase subunit B {ECO:0000313|EMBL:KFC69318.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC69318.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI000309AF5C
oxidoreductase
SCN18_13_7_16_R5_B_scaffold_1097_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8647..9306)
DNA (660bp) protein (220aa)
ABC transporter permease n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288683E
ABC transporter, permease protein {ECO:0000313|EMBL:KFC69319.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC-type transporter, integral membrane subunit
Displaying 8 items

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