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SCN18_13_7_16_R5_B_scaffold_2028

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_2028_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..278
DNA (276bp) protein (92aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Putative 2-hydroxy-3-oxopropionate reductase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHQ4_MOBAS
Putative 2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EAS49525.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCN18_13_7_16_R5_B_scaffold_2028_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(287..991)
DNA (705bp) protein (235aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSI9_9RHIZ
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:KFC73119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_2028_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1294..2298
DNA (1005bp) protein (335aa)
Periplasmic solute receptor, TRAP-type C4-dicarboxylate transport system n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHQ3_MOBAS
putative periplasmic substrate-binding protein
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
SCN18_13_7_16_R5_B_scaffold_2028_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2360..2929
DNA (570bp) protein (190aa)
Possible TRAP-type transporter, DctQ component n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHQ2_MOBAS
Possible TRAP-type transporter, DctQ component {ECO:0000313|EMBL:EAS49527.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
C4-dicarboxylate ABC transporter
SCN18_13_7_16_R5_B_scaffold_2028_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2981..4255
DNA (1275bp) protein (425aa)
TRAP-type C4-dicarboxylate transporter, large permease component n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHQ1_MOBAS
TRAP-type C4-dicarboxylate transporter, large permease component {ECO:0000313|EMBL:EAS49528.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
TRAP dicarboxylate transporter subunit DctM
SCN18_13_7_16_R5_B_scaffold_2028_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4357..5358)
DNA (1002bp) protein (334aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F0W7_9ACTO
periplasmic binding s and sugar binding domain of LacI family protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:AIO36357.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
SCN18_13_7_16_R5_B_scaffold_2028_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5363..5938)
DNA (576bp) protein (192aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2W3_9PROT
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 7 items

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