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SCN18_13_7_16_R5_B_scaffold_625

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_625_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..797
DNA (795bp) protein (265aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003752D57
Putative amino acid transporter {ECO:0000313|EMBL:KGJ67745.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
branched chain amino acid transport system substrate-binding protein
SCN18_13_7_16_R5_B_scaffold_625_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(802..1221)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HKZ4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV29236.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_625_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1239..2423)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7B55
Aminotransferase class I {ECO:0000313|EMBL:KFC74349.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aspB5; hypothetical protein
SCN18_13_7_16_R5_B_scaffold_625_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2542..3297
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:KFC74350.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC74350.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-dependent protein deacetylase, SIR2 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY27_9RHIZ
silent information regulator protein Sir2
SCN18_13_7_16_R5_B_scaffold_625_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3337..4728)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A9R2_CAUCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK22896.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCN18_13_7_16_R5_B_scaffold_625_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5101..5715
DNA (615bp) protein (205aa)
cold-shock protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036A256A
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold-shock DNA-binding domain-containing protein
SCN18_13_7_16_R5_B_scaffold_625_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5932..6609
DNA (678bp) protein (226aa)
CBS domain containing membrane protein n=5 Tax=Rhizobium meliloti RepID=F6BR81_SINMB
HPP family protein {ECO:0000313|EMBL:KFC67079.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
membrane protein
SCN18_13_7_16_R5_B_scaffold_625_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6716..7765
DNA (1050bp) protein (350aa)
Uncharacterized domain HDIG n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133H0_RHOPS
hypothetical protein
Uncharacterized domain HDIG {ECO:0000313|EMBL:ABE40769.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_13_7_16_R5_B_scaffold_625_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7773..8123)
DNA (351bp) protein (117aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX07_9RHIZ
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:KFC74352.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
iron-sulfur cluster assembly accessory protein
SCN18_13_7_16_R5_B_scaffold_625_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8239..9477
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003043399
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
deoxyguanosinetriphosphate triphosphohydrolase
SCN18_13_7_16_R5_B_scaffold_625_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9536..11302
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX09_9RHIZ
SCN18_13_7_16_R5_B_scaffold_625_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11490..13109
DNA (1620bp) protein (540aa)
Sporulation related protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX10_9RHIZ
Sporulation domain protein {ECO:0000313|EMBL:KFC74355.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sporulation domain-containing protein
SCN18_13_7_16_R5_B_scaffold_625_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13298..13711
DNA (414bp) protein (138aa)
arginase/agmatinase/formiminoglutamase (EC:3.5.3.11)
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:AGT11108.1}; EC=3.5.3.11 {ECO:0000313|EMBL:AGT11108.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Arginase/agmatinase/formiminoglutamase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YI18_PARAH
Displaying 13 items

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