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SCN18_13_7_16_R5_B_scaffold_652

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_652_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1767
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
succinate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305D55F
SCN18_13_7_16_R5_B_scaffold_652_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1782..2567
DNA (786bp) protein (262aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031F2311
SCN18_13_7_16_R5_B_scaffold_652_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2666..3904)
DNA (1239bp) protein (413aa)
Putative D-amino-acid dehydrogenase, FAD dependent {ECO:0000313|EMBL:KFC63407.1}; EC=1.4.99.1 {ECO:0000313|EMBL:KFC63407.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D7B20
putative D-amino-acid dehydrogenase, FAD dependent
SCN18_13_7_16_R5_B_scaffold_652_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3901..4695)
DNA (795bp) protein (265aa)
GMP synthase family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMS2_9RHIZ
Putative glutamine amidotransferase class-I {ECO:0000313|EMBL:KFC63406.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutamine amidotransferase
SCN18_13_7_16_R5_B_scaffold_652_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4826..5584
DNA (759bp) protein (253aa)
Transcriptional regulator, TetR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKQ7_METS4
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC63405.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TetR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_652_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5581..6786
DNA (1206bp) protein (402aa)
RND transporter MFP subunit n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000370ADF4
Putative secretion protein (HlyD) {ECO:0000313|EMBL:KFC63404.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RND family efflux transporter MFP subunit
SCN18_13_7_16_R5_B_scaffold_652_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6798..9959
DNA (3162bp) protein (1054aa)
Acriflavin resistance protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAK6_9RHIZ
Acriflavin resistance protein {ECO:0000313|EMBL:KFC63403.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acriflavin resistance protein
SCN18_13_7_16_R5_B_scaffold_652_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10003..10527)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R0J3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC63641.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_13_7_16_R5_B_scaffold_652_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10621..11526)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036B227E
Putative transmembrane protein CoxK {ECO:0000313|EMBL:KFC63402.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CoxK
SCN18_13_7_16_R5_B_scaffold_652_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11691..12557
DNA (867bp) protein (289aa)
Transcriptional regulator, LysR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6A4_STAND
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC63401.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_652_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12680..13348)
DNA (669bp) protein (223aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036901C8
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KFC63660.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 11 items

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